Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SBNO1A3KN83 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SBNO1A3KN83 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SBNO1A3KN83 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SBNO1A3KN83 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SBNO1A3KN83 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SBNO1A3KN83 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SBNO1A3KN83 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 HNRNPA1P40-201ENST00000426371 1278 ntBASIC23.38■■□□□ 1.33
SBNO1A3KN83 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SBNO1A3KN83 KRT8P23-201ENST00000560090 1207 ntBASIC23.38■■□□□ 1.33
SBNO1A3KN83 MIR4515-201ENST00000584082 81 ntBASIC23.38■■□□□ 1.33
SBNO1A3KN83 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 AL390754.1-201ENST00000619088 582 ntBASIC23.38■■□□□ 1.33
SBNO1A3KN83 AC008677.1-201ENST00000519230 1561 ntBASIC23.38■■□□□ 1.33
SBNO1A3KN83 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 GRAP-202ENST00000395635 834 ntTSL 2 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 CRB3P1-201ENST00000449338 276 ntBASIC23.37■■□□□ 1.33
SBNO1A3KN83 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 CD7-202ENST00000578509 925 ntTSL 3 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 CECR7-204ENST00000609932 568 ntTSL 2 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 AL161645.1-201ENST00000622716 1255 ntBASIC23.37■■□□□ 1.33
SBNO1A3KN83 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC23.37■■□□□ 1.33
SBNO1A3KN83 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SBNO1A3KN83 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SBNO1A3KN83 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SBNO1A3KN83 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SBNO1A3KN83 HLA-DQB1-201ENST00000374943 1656 ntBASIC23.36■■□□□ 1.33
SBNO1A3KN83 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SBNO1A3KN83 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SBNO1A3KN83 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SBNO1A3KN83 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SBNO1A3KN83 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 COX11-202ENST00000571584 1108 ntTSL 2 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SBNO1A3KN83 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SBNO1A3KN83 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SBNO1A3KN83 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SBNO1A3KN83 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SBNO1A3KN83 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SBNO1A3KN83 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 SPDYE7P-202ENST00000420373 878 ntBASIC23.35■■□□□ 1.33
SBNO1A3KN83 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC23.35■■□□□ 1.33
SBNO1A3KN83 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC23.35■■□□□ 1.33
SBNO1A3KN83 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 AP005018.1-201ENST00000525475 301 ntBASIC23.35■■□□□ 1.33
SBNO1A3KN83 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC23.35■■□□□ 1.33
SBNO1A3KN83 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
SBNO1A3KN83 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.35■■□□□ 1.33
SBNO1A3KN83 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SBNO1A3KN83 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC23.34■■□□□ 1.33
SBNO1A3KN83 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms