Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC107890.1-201ENST00000422478 521 ntBASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC009113.1-201ENST00000570267 2443 ntBASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC236430.1-201ENST00000402231 743 ntBASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 HCG4-201ENST00000418983 998 ntBASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC002472.2-201ENST00000442739 958 ntBASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 MTRF1LP2-201ENST00000506027 1122 ntBASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 AL353732.1-201ENST00000569618 1459 ntBASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 EGFEM1P-202ENST00000431685 1563 ntBASIC28.67■■■□□ 2.18
BIVM-ERCC5R4GMW8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 TREML5P-201ENST00000421694 576 ntBASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 BICD1-207ENST00000551848 1962 ntBASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
BIVM-ERCC5R4GMW8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC026150.2-201ENST00000564693 1156 ntBASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 TUBB3P1-201ENST00000405796 1332 ntBASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC055876.3-201ENST00000431496 288 ntBASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC138649.4-201ENST00000612222 287 ntBASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
BIVM-ERCC5R4GMW8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 GNAS-203ENST00000306120 1878 ntBASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 RBPMS2P1-201ENST00000437762 623 ntBASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 FAM207CP-201ENST00000443486 507 ntBASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 PPP6R2P1-201ENST00000450880 1275 ntBASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
BIVM-ERCC5R4GMW8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
BIVM-ERCC5R4GMW8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
BIVM-ERCC5R4GMW8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.17
BIVM-ERCC5R4GMW8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC28.63■■■□□ 2.17
BIVM-ERCC5R4GMW8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC28.63■■■□□ 2.17
BIVM-ERCC5R4GMW8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
BIVM-ERCC5R4GMW8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
BIVM-ERCC5R4GMW8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BIVM-ERCC5R4GMW8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
BIVM-ERCC5R4GMW8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC28.63■■■□□ 2.17
BIVM-ERCC5R4GMW8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC28.63■■■□□ 2.17
BIVM-ERCC5R4GMW8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms