Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CYP46A1Q9Y6A2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.69■□□□□ 0.9
CYP46A1Q9Y6A2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CYP46A1Q9Y6A2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CYP46A1Q9Y6A2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CYP46A1Q9Y6A2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 AL353593.2-201ENST00000602529 1483 ntBASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.68■□□□□ 0.9
CYP46A1Q9Y6A2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 AC060834.1-201ENST00000443027 2032 ntBASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 AP002414.4-201ENST00000589764 1148 ntBASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 Z69720.1-201ENST00000601483 472 ntBASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 TP73-AS1-210ENST00000637775 1455 ntBASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CYP46A1Q9Y6A2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 TOB2P1-201ENST00000469761 992 ntBASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CYP46A1Q9Y6A2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms