Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AC124067.4-201ENST00000519691 2379 ntBASIC19.9■□□□□ 0.78
CLIC4Q9Y696 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
CLIC4Q9Y696 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 AC009533.2-201ENST00000543664 586 ntBASIC19.89■□□□□ 0.77
CLIC4Q9Y696 TPSP2-201ENST00000561760 610 ntBASIC19.89■□□□□ 0.77
CLIC4Q9Y696 AC087388.1-201ENST00000571370 1112 ntBASIC19.89■□□□□ 0.77
CLIC4Q9Y696 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 AC011467.2-201ENST00000598425 242 ntBASIC19.89■□□□□ 0.77
CLIC4Q9Y696 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.89■□□□□ 0.77
CLIC4Q9Y696 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIC4Q9Y696 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.88■□□□□ 0.77
CLIC4Q9Y696 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 AC132938.5-201ENST00000624980 1813 ntBASIC19.88■□□□□ 0.77
CLIC4Q9Y696 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIC4Q9Y696 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 AC105020.1-201ENST00000435356 2205 ntBASIC19.87■□□□□ 0.77
CLIC4Q9Y696 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 TP73-AS1-210ENST00000637775 1455 ntBASIC19.87■□□□□ 0.77
CLIC4Q9Y696 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 AC111152.3-201ENST00000569699 673 ntBASIC19.87■□□□□ 0.77
CLIC4Q9Y696 AP002414.4-201ENST00000589764 1148 ntBASIC19.87■□□□□ 0.77
CLIC4Q9Y696 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIC4Q9Y696 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIC4Q9Y696 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms