Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB1Q9Y5G3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
PCDHGB1Q9Y5G3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
PCDHGB1Q9Y5G3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGB1Q9Y5G3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB1Q9Y5G3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB1Q9Y5G3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB1Q9Y5G3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB1Q9Y5G3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PCDHGB1Q9Y5G3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 SLC25A1P2-201ENST00000430693 912 ntBASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 AL049597.2-201ENST00000565575 961 ntBASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CR769767.2-201ENST00000622735 460 ntBASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB1Q9Y5G3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 AC026471.5-201ENST00000615068 467 ntBASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms