Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF6Q9Y252 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF6Q9Y252 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 Z83836.1-201ENST00000624605 1642 ntBASIC16.46■□□□□ 0.23
RNF6Q9Y252 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 TOB2P1-201ENST00000469761 992 ntBASIC16.46■□□□□ 0.23
RNF6Q9Y252 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 AL732292.2-201ENST00000609649 430 ntBASIC16.46■□□□□ 0.23
RNF6Q9Y252 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF6Q9Y252 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
RNF6Q9Y252 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RNF6Q9Y252 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 AC008894.3-201ENST00000624324 3103 ntBASIC16.45■□□□□ 0.22
RNF6Q9Y252 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 LINC01126-201ENST00000623515 1646 ntBASIC16.45■□□□□ 0.22
RNF6Q9Y252 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 TSPY19P-201ENST00000418461 509 ntBASIC16.45■□□□□ 0.22
RNF6Q9Y252 TSPY18P-201ENST00000441642 509 ntBASIC16.45■□□□□ 0.22
RNF6Q9Y252 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 AL121772.3-201ENST00000610840 674 ntBASIC16.45■□□□□ 0.22
RNF6Q9Y252 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF6Q9Y252 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF6Q9Y252 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF6Q9Y252 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF6Q9Y252 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF6Q9Y252 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF6Q9Y252 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF6Q9Y252 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF6Q9Y252 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF6Q9Y252 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF6Q9Y252 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF6Q9Y252 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms