Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 AC010947.1-201ENST00000623454 693 ntBASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 AL031432.5-201ENST00000641059 760 ntBASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 LINC00167-201ENST00000530583 1419 ntBASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 AC108860.2-201ENST00000562760 2183 ntBASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB16Q9NRJ7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 ECEL1P3-201ENST00000427961 737 ntBASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHB16Q9NRJ7 LINC01568-207ENST00000641790 1380 ntBASIC15.21■□□□□ 0.02
PCDHB16Q9NRJ7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHB16Q9NRJ7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDHB16Q9NRJ7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
PCDHB16Q9NRJ7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHB16Q9NRJ7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 AC087499.1-201ENST00000418141 1075 ntBASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 ECEL1P2-202ENST00000465689 757 ntBASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 AC145285.6-201ENST00000604632 637 ntBASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 AC140113.3-201ENST00000605663 199 ntBASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 FAM87A-204ENST00000613235 858 ntBASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB16Q9NRJ7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms