Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 FAM220CP-201ENST00000395253 831 ntBASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 AC103564.2-201ENST00000432853 1299 ntBASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 DUSP5P1-201ENST00000441325 1139 ntBASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 AC111152.3-201ENST00000569699 673 ntBASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 AC019129.2-201ENST00000609837 1235 ntBASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEUROD4Q9HD90 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 AC012313.1-201ENST00000593393 3059 ntBASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 AC106820.2-201ENST00000563775 3264 ntBASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 AD000864.1-201ENST00000624076 2295 ntBASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 AC005336.2-201ENST00000593183 939 ntBASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 AL121672.3-201ENST00000608644 468 ntBASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 AC069148.1-201ENST00000608741 768 ntBASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEUROD4Q9HD90 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 AL845331.1-201ENST00000424978 1190 ntBASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 CHCHD2P8-201ENST00000429873 447 ntBASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 BX276092.5-203ENST00000456199 560 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms