Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 AC132938.5-201ENST00000624980 1813 ntBASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 NEFHP1-201ENST00000412845 2629 ntBASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 KLF4P1-201ENST00000412782 1185 ntBASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 RPS2P1-201ENST00000434010 821 ntBASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 PRYP5-201ENST00000451909 266 ntBASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 AC002558.1-201ENST00000488906 803 ntBASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 AC025062.2-201ENST00000605477 670 ntBASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF304Q9HCX3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF304Q9HCX3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ZNF304Q9HCX3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF304Q9HCX3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF304Q9HCX3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 MYCLP1-201ENST00000372451 1075 ntBASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 AL590627.1-203ENST00000421194 1026 ntBASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 STK19B-204ENST00000512515 211 ntBASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 FAM215A-202ENST00000632077 792 ntBASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 TNRC18P3-201ENST00000441896 2691 ntBASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF304Q9HCX3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 BX640515.1-201ENST00000617215 977 ntBASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF304Q9HCX3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms