Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBQLN3Q9H347 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 AC022211.2-201ENST00000585075 2527 ntBASIC16.17■□□□□ 0.18
UBQLN3Q9H347 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 SAPCD2P3-201ENST00000455031 850 ntBASIC16.17■□□□□ 0.18
UBQLN3Q9H347 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 AC104692.2-201ENST00000603054 253 ntBASIC16.17■□□□□ 0.18
UBQLN3Q9H347 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBQLN3Q9H347 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 HLA-J-201ENST00000462773 1622 ntBASIC16.16■□□□□ 0.18
UBQLN3Q9H347 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.16■□□□□ 0.18
UBQLN3Q9H347 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 AC026396.1-201ENST00000419388 421 ntBASIC16.16■□□□□ 0.18
UBQLN3Q9H347 AC007967.3-201ENST00000434308 558 ntBASIC16.16■□□□□ 0.18
UBQLN3Q9H347 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms