Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 AL450487.1-201ENST00000426799 995 ntBASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 AP005901.3-202ENST00000581653 237 ntBASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 AC090616.6-201ENST00000582640 721 ntBASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
UPF3BQ9BZI7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 FAM86EP-206ENST00000510506 987 ntBASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 AL121956.5-201ENST00000625261 221 ntBASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF3BQ9BZI7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 AC011840.4-201ENST00000578471 627 ntBASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 AC016734.2-201ENST00000624325 1377 ntBASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.79■□□□□ 0.92
UPF3BQ9BZI7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 AL121761.2-201ENST00000598007 1648 ntBASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
UPF3BQ9BZI7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms