Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
NPAS1Q99742 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS1Q99742 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.91■□□□□ 0.14
NPAS1Q99742 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS1Q99742 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS1Q99742 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS1Q99742 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS1Q99742 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS1Q99742 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.9■□□□□ 0.14
NPAS1Q99742 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS1Q99742 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
NPAS1Q99742 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
NPAS1Q99742 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.9■□□□□ 0.14
NPAS1Q99742 ABCD1P5-201ENST00000445663 754 ntBASIC15.9■□□□□ 0.14
NPAS1Q99742 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NPAS1Q99742 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.9■□□□□ 0.14
NPAS1Q99742 REXO1L6P-202ENST00000619970 1078 ntBASIC15.9■□□□□ 0.14
NPAS1Q99742 LINC01451-201ENST00000623792 534 ntBASIC15.9■□□□□ 0.14
NPAS1Q99742 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS1Q99742 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS1Q99742 AC148477.5-201ENST00000625164 1645 ntBASIC15.9■□□□□ 0.14
NPAS1Q99742 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
NPAS1Q99742 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS1Q99742 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS1Q99742 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS1Q99742 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS1Q99742 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
NPAS1Q99742 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS1Q99742 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS1Q99742 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.89■□□□□ 0.13
NPAS1Q99742 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 MST1L-201ENST00000442552 2185 ntBASIC15.89■□□□□ 0.13
NPAS1Q99742 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
NPAS1Q99742 AP005117.1-201ENST00000584346 1413 ntBASIC15.89■□□□□ 0.13
NPAS1Q99742 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
NPAS1Q99742 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS1Q99742 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.89■□□□□ 0.13
NPAS1Q99742 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS1Q99742 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS1Q99742 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 RN7SL510P-201ENST00000581311 263 ntBASIC15.89■□□□□ 0.13
NPAS1Q99742 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.89■□□□□ 0.13
NPAS1Q99742 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS1Q99742 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS1Q99742 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS1Q99742 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NPAS1Q99742 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS1Q99742 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
NPAS1Q99742 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS1Q99742 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS1Q99742 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS1Q99742 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
NPAS1Q99742 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.88■□□□□ 0.13
NPAS1Q99742 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.88■□□□□ 0.13
NPAS1Q99742 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.88■□□□□ 0.13
NPAS1Q99742 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.88■□□□□ 0.13
NPAS1Q99742 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.88■□□□□ 0.13
NPAS1Q99742 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS1Q99742 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NPAS1Q99742 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
NPAS1Q99742 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
NPAS1Q99742 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms