Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PHOX2BQ99453 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHOX2BQ99453 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 LINC00602-201ENST00000629776 2065 ntBASIC17.59■□□□□ 0.41
PHOX2BQ99453 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 AC092919.2-201ENST00000623631 1645 ntBASIC17.59■□□□□ 0.41
PHOX2BQ99453 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 SPDYE21P-201ENST00000413323 827 ntBASIC17.59■□□□□ 0.41
PHOX2BQ99453 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 RPS2P32-201ENST00000439199 892 ntBASIC17.59■□□□□ 0.41
PHOX2BQ99453 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 IGHV3-42-201ENST00000520410 361 ntBASIC17.59■□□□□ 0.41
PHOX2BQ99453 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHOX2BQ99453 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PHOX2BQ99453 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHOX2BQ99453 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHOX2BQ99453 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHOX2BQ99453 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHOX2BQ99453 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHOX2BQ99453 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PHOX2BQ99453 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PHOX2BQ99453 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PHOX2BQ99453 SIGLEC16-201ENST00000599858 1437 ntBASIC17.58■□□□□ 0.41
PHOX2BQ99453 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 AC107890.1-201ENST00000422478 521 ntBASIC17.58■□□□□ 0.4
PHOX2BQ99453 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 OR7E47P-204ENST00000575924 449 ntBASIC17.58■□□□□ 0.4
PHOX2BQ99453 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 AC023141.13-201ENST00000604991 943 ntBASIC17.58■□□□□ 0.4
PHOX2BQ99453 AL353135.1-201ENST00000606729 504 ntBASIC17.58■□□□□ 0.4
PHOX2BQ99453 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.58■□□□□ 0.4
PHOX2BQ99453 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms