Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 AC092118.2-201ENST00000613495 667 ntBASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 AL024508.2-201ENST00000607749 1894 ntBASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IPQ96QF0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 AL023284.2-201ENST00000405850 579 ntBASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 DUSP5P2-201ENST00000426873 1033 ntBASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 AC131212.4-201ENST00000623606 975 ntBASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 AC009949.1-201ENST00000623048 1830 ntBASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IPQ96QF0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 HLA-B-256ENST00000639848 1089 ntBASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 AC092384.3-202ENST00000564646 2873 ntBASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB3IPQ96QF0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms