Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 AL031284.1-201ENST00000419297 478 ntBASIC17.97■□□□□ 0.47
RPRD1AQ96P16 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.97■□□□□ 0.47
RPRD1AQ96P16 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 FZD10-202ENST00000539839 3282 ntBASIC17.96■□□□□ 0.47
RPRD1AQ96P16 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 RPS2P28-201ENST00000314255 741 ntBASIC17.96■□□□□ 0.47
RPRD1AQ96P16 HNRNPDP1-201ENST00000439535 754 ntBASIC17.96■□□□□ 0.47
RPRD1AQ96P16 AC079776.4-201ENST00000511039 504 ntBASIC17.96■□□□□ 0.47
RPRD1AQ96P16 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 OR7E14P-202ENST00000530490 1290 ntBASIC17.96■□□□□ 0.47
RPRD1AQ96P16 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 AP001005.1-201ENST00000571755 1248 ntBASIC17.96■□□□□ 0.47
RPRD1AQ96P16 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RPRD1AQ96P16 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
RPRD1AQ96P16 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
RPRD1AQ96P16 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
RPRD1AQ96P16 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.96■□□□□ 0.46
RPRD1AQ96P16 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.96■□□□□ 0.46
RPRD1AQ96P16 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms