Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 MYCLP2-201ENST00000449268 967 ntBASIC17.47■□□□□ 0.39
TTC28Q96AY4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC28Q96AY4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 AL590787.1-201ENST00000568856 1315 ntBASIC17.46■□□□□ 0.39
TTC28Q96AY4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC28Q96AY4 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 AC109462.3-201ENST00000573934 613 ntBASIC17.46■□□□□ 0.39
TTC28Q96AY4 MIR4515-201ENST00000584082 81 ntBASIC17.46■□□□□ 0.39
TTC28Q96AY4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC28Q96AY4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 AC125437.2-201ENST00000625180 2167 ntBASIC17.46■□□□□ 0.39
TTC28Q96AY4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC28Q96AY4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC28Q96AY4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC28Q96AY4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC28Q96AY4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC28Q96AY4 CTBP2P3-201ENST00000585629 1255 ntBASIC17.46■□□□□ 0.39
TTC28Q96AY4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC28Q96AY4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TTC28Q96AY4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.46■□□□□ 0.38
TTC28Q96AY4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
TTC28Q96AY4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 AC093525.8-201ENST00000624099 1342 ntBASIC17.45■□□□□ 0.38
TTC28Q96AY4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.45■□□□□ 0.38
TTC28Q96AY4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 RPS2P36-201ENST00000456516 831 ntBASIC17.45■□□□□ 0.38
TTC28Q96AY4 AC108725.1-201ENST00000495472 409 ntBASIC17.45■□□□□ 0.38
TTC28Q96AY4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.45■□□□□ 0.38
TTC28Q96AY4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.45■□□□□ 0.38
TTC28Q96AY4 SPCS2P2-201ENST00000603270 608 ntBASIC17.45■□□□□ 0.38
TTC28Q96AY4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TTC28Q96AY4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC28Q96AY4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.45■□□□□ 0.38
TTC28Q96AY4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.45■□□□□ 0.38
TTC28Q96AY4 FO681548.1-201ENST00000455617 1132 ntBASIC17.45■□□□□ 0.38
TTC28Q96AY4 CROCCP4-201ENST00000457096 498 ntBASIC17.45■□□□□ 0.38
TTC28Q96AY4 AC135586.1-201ENST00000539323 574 ntBASIC17.45■□□□□ 0.38
TTC28Q96AY4 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.45■□□□□ 0.38
TTC28Q96AY4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.45■□□□□ 0.38
TTC28Q96AY4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.45■□□□□ 0.38
TTC28Q96AY4 AL118558.3-201ENST00000607414 1079 ntBASIC17.45■□□□□ 0.38
TTC28Q96AY4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TTC28Q96AY4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 CTBP2P5-201ENST00000454986 1264 ntBASIC17.44■□□□□ 0.38
TTC28Q96AY4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 AC004790.1-201ENST00000612686 536 ntBASIC17.44■□□□□ 0.38
TTC28Q96AY4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 AC099336.1-201ENST00000417053 1171 ntBASIC17.44■□□□□ 0.38
TTC28Q96AY4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 AL138918.1-201ENST00000568306 659 ntBASIC17.44■□□□□ 0.38
TTC28Q96AY4 AC027307.2-201ENST00000591252 911 ntBASIC17.44■□□□□ 0.38
TTC28Q96AY4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
TTC28Q96AY4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TTC28Q96AY4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms