Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 AC021087.4-201ENST00000563761 564 ntBASIC18.4■□□□□ 0.54
ATP2A3Q93084 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 AC097374.2-201ENST00000618617 1306 ntBASIC18.4■□□□□ 0.54
ATP2A3Q93084 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 ZNF259P1-201ENST00000407656 1365 ntBASIC18.4■□□□□ 0.54
ATP2A3Q93084 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
ATP2A3Q93084 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.54
ATP2A3Q93084 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP2A3Q93084 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP2A3Q93084 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP2A3Q93084 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP2A3Q93084 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ATP2A3Q93084 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A3Q93084 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A3Q93084 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A3Q93084 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 LINC00896-202ENST00000609602 2128 ntBASIC18.39■□□□□ 0.53
ATP2A3Q93084 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A3Q93084 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A3Q93084 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 CROCCP1-201ENST00000426910 5675 ntBASIC18.39■□□□□ 0.53
ATP2A3Q93084 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A3Q93084 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A3Q93084 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A3Q93084 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A3Q93084 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP2A3Q93084 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATP2A3Q93084 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP2A3Q93084 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ATP2A3Q93084 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP2A3Q93084 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2A3Q93084 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 AC007967.3-201ENST00000434308 558 ntBASIC18.38■□□□□ 0.53
ATP2A3Q93084 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2A3Q93084 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2A3Q93084 AC116407.3-201ENST00000623905 1129 ntBASIC18.38■□□□□ 0.53
ATP2A3Q93084 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP2A3Q93084 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 AL096828.2-201ENST00000567259 1965 ntBASIC18.38■□□□□ 0.53
ATP2A3Q93084 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A3Q93084 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 RPS2P1-201ENST00000434010 821 ntBASIC18.37■□□□□ 0.53
ATP2A3Q93084 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 OR7E14P-202ENST00000530490 1290 ntBASIC18.37■□□□□ 0.53
ATP2A3Q93084 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms