Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2AF1L4Q8WU68 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2AF1L4Q8WU68 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
U2AF1L4Q8WU68 KRT8P47-201ENST00000604727 1398 ntBASIC19.93■□□□□ 0.78
U2AF1L4Q8WU68 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
U2AF1L4Q8WU68 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.93■□□□□ 0.78
U2AF1L4Q8WU68 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
U2AF1L4Q8WU68 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2AF1L4Q8WU68 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 MYLKP1-201ENST00000509077 1580 ntBASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 IGLL3P-201ENST00000412472 434 ntBASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 AC004877.2-201ENST00000623941 599 ntBASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.92■□□□□ 0.78
U2AF1L4Q8WU68 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 RPS15P9-201ENST00000494093 319 ntBASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 AC025678.2-201ENST00000562061 970 ntBASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2AF1L4Q8WU68 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 AC069262.1-201ENST00000539058 672 ntBASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 AL513210.1-201ENST00000629608 234 ntBASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2AF1L4Q8WU68 BCAR1-209ENST00000546196 1340 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms