Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 AC063952.2-201ENST00000498792 1227 ntBASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 RN7SL850P-201ENST00000579959 291 ntBASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLHC1Q8NHS4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CLHC1Q8NHS4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 AC096633.1-201ENST00000422446 749 ntBASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 AL671277.2-201ENST00000458060 996 ntBASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 AC022616.7-201ENST00000525383 220 ntBASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 AL139327.4-201ENST00000612362 153 ntBASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 AL121761.2-201ENST00000598007 1648 ntBASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 AC106886.4-201ENST00000623557 2502 ntBASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.76■□□□□ 0.27
CLHC1Q8NHS4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 AL645929.1-201ENST00000420084 975 ntBASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLHC1Q8NHS4 AC124067.4-201ENST00000519691 2379 ntBASIC16.74■□□□□ 0.27
CLHC1Q8NHS4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLHC1Q8NHS4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.74■□□□□ 0.27
CLHC1Q8NHS4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLHC1Q8NHS4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.74■□□□□ 0.27
CLHC1Q8NHS4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.74■□□□□ 0.27
CLHC1Q8NHS4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLHC1Q8NHS4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms