Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.81■□□□□ 0.44
SIX5Q8N196 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.81■□□□□ 0.44
SIX5Q8N196 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.81■□□□□ 0.44
SIX5Q8N196 AC109462.3-201ENST00000573934 613 ntBASIC17.81■□□□□ 0.44
SIX5Q8N196 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.81■□□□□ 0.44
SIX5Q8N196 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.81■□□□□ 0.44
SIX5Q8N196 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.81■□□□□ 0.44
SIX5Q8N196 AC012645.4-201ENST00000610691 1061 ntBASIC17.81■□□□□ 0.44
SIX5Q8N196 AC006116.8-202ENST00000587620 1550 ntBASIC17.81■□□□□ 0.44
SIX5Q8N196 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SIX5Q8N196 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX5Q8N196 PI4KAP1-204ENST00000612579 1703 ntBASIC17.81■□□□□ 0.44
SIX5Q8N196 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX5Q8N196 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.8■□□□□ 0.44
SIX5Q8N196 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX5Q8N196 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX5Q8N196 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.8■□□□□ 0.44
SIX5Q8N196 TIMM8BP1-201ENST00000452384 211 ntBASIC17.8■□□□□ 0.44
SIX5Q8N196 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SIX5Q8N196 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.8■□□□□ 0.44
SIX5Q8N196 STK19B-204ENST00000512515 211 ntBASIC17.8■□□□□ 0.44
SIX5Q8N196 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.8■□□□□ 0.44
SIX5Q8N196 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.8■□□□□ 0.44
SIX5Q8N196 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.8■□□□□ 0.44
SIX5Q8N196 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 AL353135.1-201ENST00000606729 504 ntBASIC17.8■□□□□ 0.44
SIX5Q8N196 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX5Q8N196 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX5Q8N196 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SIX5Q8N196 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SIX5Q8N196 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.79■□□□□ 0.44
SIX5Q8N196 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.79■□□□□ 0.44
SIX5Q8N196 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SIX5Q8N196 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SIX5Q8N196 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.79■□□□□ 0.44
SIX5Q8N196 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
SIX5Q8N196 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.79■□□□□ 0.44
SIX5Q8N196 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 AC011270.2-201ENST00000624293 2550 ntBASIC17.79■□□□□ 0.44
SIX5Q8N196 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.79■□□□□ 0.44
SIX5Q8N196 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.79■□□□□ 0.44
SIX5Q8N196 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SIX5Q8N196 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.79■□□□□ 0.44
SIX5Q8N196 AC112191.1-201ENST00000523689 701 ntBASIC17.79■□□□□ 0.44
SIX5Q8N196 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.79■□□□□ 0.44
SIX5Q8N196 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.79■□□□□ 0.44
SIX5Q8N196 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.79■□□□□ 0.44
SIX5Q8N196 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.79■□□□□ 0.44
SIX5Q8N196 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
SIX5Q8N196 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
SIX5Q8N196 AC019129.2-201ENST00000609837 1235 ntBASIC17.79■□□□□ 0.44
SIX5Q8N196 AC009093.7-201ENST00000623853 1223 ntBASIC17.79■□□□□ 0.44
SIX5Q8N196 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.79■□□□□ 0.44
SIX5Q8N196 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SIX5Q8N196 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.79■□□□□ 0.44
SIX5Q8N196 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
SIX5Q8N196 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.79■□□□□ 0.44
SIX5Q8N196 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.79■□□□□ 0.44
SIX5Q8N196 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX5Q8N196 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.78■□□□□ 0.44
SIX5Q8N196 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms