Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 AL049840.3-201ENST00000602669 611 ntBASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM4Q86VH4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM4Q86VH4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 AC105339.3-201ENST00000560043 636 ntBASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 AL133373.2-201ENST00000623187 2828 ntBASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRTM4Q86VH4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
LRRTM4Q86VH4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRTM4Q86VH4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRRTM4Q86VH4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRTM4Q86VH4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRTM4Q86VH4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.08■□□□□ 0.33
LRRTM4Q86VH4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms