Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.8□□□□□ -0.04
RAI1Q7Z5J4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 AC002558.1-201ENST00000488906 803 ntBASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 IGHV3-52-201ENST00000519770 353 ntBASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 LINC02084-201ENST00000606069 1096 ntBASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 AC116407.2-201ENST00000613639 860 ntBASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 AC091812.2-201ENST00000619081 385 ntBASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAI1Q7Z5J4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 AC007064.4-201ENST00000637740 555 ntBASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 AC005332.8-201ENST00000622750 2735 ntBASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 AL645939.2-201ENST00000427340 991 ntBASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAI1Q7Z5J4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 MYCLP1-201ENST00000372451 1075 ntBASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 FAM58CP-201ENST00000435741 640 ntBASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 CEND1P1-201ENST00000451006 455 ntBASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.77□□□□□ -0.04
RAI1Q7Z5J4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms