Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TREML4Q6UXN2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TREML4Q6UXN2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TREML4Q6UXN2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TREML4Q6UXN2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TREML4Q6UXN2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.11
TREML4Q6UXN2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TREML4Q6UXN2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.33□□□□□ -0.12
TREML4Q6UXN2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 AF186996.4-201ENST00000467186 377 ntBASIC14.33□□□□□ -0.12
TREML4Q6UXN2 VENTXP7-201ENST00000475503 772 ntBASIC14.33□□□□□ -0.12
TREML4Q6UXN2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 AC016180.1-201ENST00000567945 403 ntBASIC14.33□□□□□ -0.12
TREML4Q6UXN2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 MIR3180-5-201ENST00000583743 153 ntBASIC14.33□□□□□ -0.12
TREML4Q6UXN2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 TP73-AS1-207ENST00000624167 988 ntBASIC14.33□□□□□ -0.12
TREML4Q6UXN2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TREML4Q6UXN2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 NUS1P2-201ENST00000417358 873 ntBASIC14.32□□□□□ -0.12
TREML4Q6UXN2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 KRT18P67-201ENST00000432816 1264 ntBASIC14.32□□□□□ -0.12
TREML4Q6UXN2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TREML4Q6UXN2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TREML4Q6UXN2 NKILA-202ENST00000614771 2598 ntBASIC14.31□□□□□ -0.12
TREML4Q6UXN2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TREML4Q6UXN2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TREML4Q6UXN2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
TREML4Q6UXN2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TREML4Q6UXN2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TREML4Q6UXN2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TREML4Q6UXN2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms