Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PMS2P7-201ENST00000506558 1336 ntBASIC18.31■□□□□ 0.52
RNF43Q68DV7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF43Q68DV7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 NKILA-202ENST00000614771 2598 ntBASIC18.31■□□□□ 0.52
RNF43Q68DV7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF43Q68DV7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF43Q68DV7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF43Q68DV7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 BX842568.4-201ENST00000421222 227 ntBASIC18.31■□□□□ 0.52
RNF43Q68DV7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 AC093909.1-201ENST00000504731 1122 ntBASIC18.31■□□□□ 0.52
RNF43Q68DV7 RNA5SP419-201ENST00000515908 135 ntBASIC18.31■□□□□ 0.52
RNF43Q68DV7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 TERC-201ENST00000602385 541 ntBASIC18.31■□□□□ 0.52
RNF43Q68DV7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF43Q68DV7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF43Q68DV7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF43Q68DV7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF43Q68DV7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF43Q68DV7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF43Q68DV7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 AC022898.2-201ENST00000616822 1312 ntBASIC18.3■□□□□ 0.52
RNF43Q68DV7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 RBM17P3-201ENST00000417687 1192 ntBASIC18.3■□□□□ 0.52
RNF43Q68DV7 AL031284.1-201ENST00000419297 478 ntBASIC18.3■□□□□ 0.52
RNF43Q68DV7 AC007967.3-201ENST00000434308 558 ntBASIC18.3■□□□□ 0.52
RNF43Q68DV7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 AC132008.2-207ENST00000454517 770 ntBASIC18.3■□□□□ 0.52
RNF43Q68DV7 RNPS1P1-201ENST00000507437 918 ntBASIC18.3■□□□□ 0.52
RNF43Q68DV7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF43Q68DV7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF43Q68DV7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 AF186996.4-201ENST00000467186 377 ntBASIC18.29■□□□□ 0.52
RNF43Q68DV7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF43Q68DV7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RNF43Q68DV7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms