Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRK2Q5S007 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
LRRK2Q5S007 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.96□□□□□ -0.02
LRRK2Q5S007 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRK2Q5S007 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
LRRK2Q5S007 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.96□□□□□ -0.02
LRRK2Q5S007 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LRRK2Q5S007 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.96□□□□□ -0.02
LRRK2Q5S007 AC008494.3-201ENST00000606615 944 ntBASIC14.96□□□□□ -0.02
LRRK2Q5S007 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.96□□□□□ -0.02
LRRK2Q5S007 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.96□□□□□ -0.02
LRRK2Q5S007 AL109936.8-201ENST00000641772 604 ntBASIC14.96□□□□□ -0.02
LRRK2Q5S007 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.96□□□□□ -0.02
LRRK2Q5S007 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRK2Q5S007 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRK2Q5S007 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 AC007967.4-201ENST00000614700 386 ntBASIC14.95□□□□□ -0.02
LRRK2Q5S007 AC008267.7-201ENST00000624570 1194 ntBASIC14.95□□□□□ -0.02
LRRK2Q5S007 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRK2Q5S007 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRK2Q5S007 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 RN7SL837P-201ENST00000463010 287 ntBASIC14.94□□□□□ -0.02
LRRK2Q5S007 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 SPDYE12P-201ENST00000618416 771 ntBASIC14.94□□□□□ -0.02
LRRK2Q5S007 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 AL590787.1-201ENST00000568856 1315 ntBASIC14.94□□□□□ -0.02
LRRK2Q5S007 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRK2Q5S007 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
LRRK2Q5S007 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms