Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-BQ31612 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
HLA-BQ31612 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-BQ31612 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-BQ31612 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-BQ31612 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-BQ31612 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HLA-BQ31612 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-BQ31612 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-BQ31612 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HLA-BQ31612 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.81■□□□□ 0.28
HLA-BQ31612 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-BQ31612 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-BQ31612 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-BQ31612 AC140658.5-201ENST00000438532 169 ntBASIC16.81■□□□□ 0.28
HLA-BQ31612 AL592309.1-201ENST00000443127 649 ntBASIC16.81■□□□□ 0.28
HLA-BQ31612 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-BQ31612 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HLA-BQ31612 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.81■□□□□ 0.28
HLA-BQ31612 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-BQ31612 AL390955.2-201ENST00000603032 514 ntBASIC16.81■□□□□ 0.28
HLA-BQ31612 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-BQ31612 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 AL645728.2-201ENST00000641974 660 ntBASIC16.81■□□□□ 0.28
HLA-BQ31612 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-BQ31612 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-BQ31612 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HLA-BQ31612 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-BQ31612 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-BQ31612 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
HLA-BQ31612 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-BQ31612 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HLA-BQ31612 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-BQ31612 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-BQ31612 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 AC244107.1-201ENST00000442033 332 ntBASIC16.8■□□□□ 0.28
HLA-BQ31612 AC093214.1-201ENST00000511688 1107 ntBASIC16.8■□□□□ 0.28
HLA-BQ31612 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-BQ31612 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-BQ31612 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-BQ31612 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-BQ31612 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-BQ31612 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-BQ31612 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HLA-BQ31612 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-BQ31612 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-BQ31612 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-BQ31612 AC079140.1-201ENST00000508039 487 ntBASIC16.79■□□□□ 0.28
HLA-BQ31612 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
HLA-BQ31612 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.79■□□□□ 0.28
HLA-BQ31612 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-BQ31612 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-BQ31612 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms