Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FAM8A2P-201ENST00000528813 1142 ntBASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 AL162274.1-201ENST00000617191 1098 ntBASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 AC068587.10-201ENST00000641210 219 ntBASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO4Q2I0M5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 AC027369.6-201ENST00000525520 931 ntBASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO4Q2I0M5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 AC100757.3-201ENST00000622361 1406 ntBASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 AC022144.1-201ENST00000602255 1580 ntBASIC16.77■□□□□ 0.27
RSPO4Q2I0M5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 AC098614.1-201ENST00000368528 745 ntBASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 AC004945.1-201ENST00000416738 983 ntBASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 KRT8P23-201ENST00000560090 1207 ntBASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 IGHV3-72-202ENST00000621503 303 ntBASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 AL590560.3-201ENST00000623350 461 ntBASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 AC018445.3-201ENST00000624177 1945 ntBASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RSPO4Q2I0M5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RSPO4Q2I0M5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms