Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.41■□□□□ 0.22
RPS3AP61247 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.41■□□□□ 0.22
RPS3AP61247 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.41■□□□□ 0.22
RPS3AP61247 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.41■□□□□ 0.22
RPS3AP61247 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.41■□□□□ 0.22
RPS3AP61247 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.41■□□□□ 0.22
RPS3AP61247 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS3AP61247 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.4■□□□□ 0.22
RPS3AP61247 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS3AP61247 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RPS3AP61247 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RPS3AP61247 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RPS3AP61247 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS3AP61247 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS3AP61247 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.4■□□□□ 0.22
RPS3AP61247 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS3AP61247 AC093458.2-201ENST00000623150 629 ntBASIC16.4■□□□□ 0.22
RPS3AP61247 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RPS3AP61247 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RPS3AP61247 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS3AP61247 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RPS3AP61247 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS3AP61247 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RPS3AP61247 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RPS3AP61247 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS3AP61247 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RPS3AP61247 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RPS3AP61247 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS3AP61247 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS3AP61247 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
RPS3AP61247 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.39■□□□□ 0.21
RPS3AP61247 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.39■□□□□ 0.21
RPS3AP61247 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS3AP61247 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
RPS3AP61247 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 AL023806.1-201ENST00000603994 1649 ntBASIC16.39■□□□□ 0.21
RPS3AP61247 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RPS3AP61247 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS3AP61247 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.39■□□□□ 0.21
RPS3AP61247 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.39■□□□□ 0.21
RPS3AP61247 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS3AP61247 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.39■□□□□ 0.21
RPS3AP61247 KRT8P26-201ENST00000534154 1276 ntBASIC16.39■□□□□ 0.21
RPS3AP61247 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.39■□□□□ 0.21
RPS3AP61247 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.39■□□□□ 0.21
RPS3AP61247 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RPS3AP61247 GPR32P1-201ENST00000601788 811 ntBASIC16.39■□□□□ 0.21
RPS3AP61247 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.39■□□□□ 0.21
RPS3AP61247 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.39■□□□□ 0.21
RPS3AP61247 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RPS3AP61247 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RPS3AP61247 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS3AP61247 SDHAP2-201ENST00000455183 2001 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms