Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGA2P52926 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
HMGA2P52926 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 AL049757.1-201ENST00000616842 1596 ntBASIC15.92■□□□□ 0.14
HMGA2P52926 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGA2P52926 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
HMGA2P52926 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HMGA2P52926 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HMGA2P52926 AC026691.1-201ENST00000602502 2017 ntBASIC15.91■□□□□ 0.14
HMGA2P52926 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGA2P52926 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGA2P52926 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGA2P52926 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.91■□□□□ 0.14
HMGA2P52926 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGA2P52926 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 AC005332.3-201ENST00000589904 676 ntBASIC15.91■□□□□ 0.14
HMGA2P52926 AL390719.2-201ENST00000606993 987 ntBASIC15.91■□□□□ 0.14
HMGA2P52926 AC011558.1-201ENST00000623459 338 ntBASIC15.91■□□□□ 0.14
HMGA2P52926 TMEM191A-211ENST00000637163 1067 ntBASIC15.91■□□□□ 0.14
HMGA2P52926 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA2P52926 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGA2P52926 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGA2P52926 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGA2P52926 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGA2P52926 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGA2P52926 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGA2P52926 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 AC103564.2-201ENST00000432853 1299 ntBASIC15.9■□□□□ 0.14
HMGA2P52926 SLC25A3P1-201ENST00000443844 931 ntBASIC15.9■□□□□ 0.14
HMGA2P52926 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HMGA2P52926 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGA2P52926 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.9■□□□□ 0.14
HMGA2P52926 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.9■□□□□ 0.14
HMGA2P52926 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGA2P52926 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGA2P52926 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
HMGA2P52926 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGA2P52926 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGA2P52926 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGA2P52926 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
HMGA2P52926 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HMGA2P52926 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
HMGA2P52926 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGA2P52926 CYP2T1P-202ENST00000641596 2535 ntBASIC15.9■□□□□ 0.14
HMGA2P52926 AC092171.3-201ENST00000610122 2651 ntBASIC15.9■□□□□ 0.14
HMGA2P52926 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA2P52926 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 AC046158.3-201ENST00000624947 2558 ntBASIC15.89■□□□□ 0.13
HMGA2P52926 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HMGA2P52926 HBZP1-201ENST00000354915 429 ntBASIC15.89■□□□□ 0.13
HMGA2P52926 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HMGA2P52926 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGA2P52926 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGA2P52926 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGA2P52926 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGA2P52926 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGA2P52926 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGA2P52926 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms