Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.39■□□□□ 0.05
CCR9P51686 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.39■□□□□ 0.05
CCR9P51686 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CCR9P51686 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCR9P51686 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.39■□□□□ 0.05
CCR9P51686 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCR9P51686 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CCR9P51686 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.39■□□□□ 0.05
CCR9P51686 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.39■□□□□ 0.05
CCR9P51686 AC140113.3-201ENST00000605663 199 ntBASIC15.39■□□□□ 0.05
CCR9P51686 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.39■□□□□ 0.05
CCR9P51686 TMEM191A-211ENST00000637163 1067 ntBASIC15.39■□□□□ 0.05
CCR9P51686 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCR9P51686 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.39■□□□□ 0.05
CCR9P51686 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCR9P51686 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCR9P51686 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCR9P51686 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.39■□□□□ 0.05
CCR9P51686 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CCR9P51686 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CCR9P51686 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.39■□□□□ 0.05
CCR9P51686 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCR9P51686 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.39■□□□□ 0.05
CCR9P51686 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCR9P51686 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CCR9P51686 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.38■□□□□ 0.05
CCR9P51686 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CCR9P51686 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 FLJ38576-201ENST00000623820 2459 ntBASIC15.38■□□□□ 0.05
CCR9P51686 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.38■□□□□ 0.05
CCR9P51686 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CCR9P51686 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCR9P51686 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CCR9P51686 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.38■□□□□ 0.05
CCR9P51686 FAM8A6P-201ENST00000407496 1135 ntBASIC15.38■□□□□ 0.05
CCR9P51686 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.38■□□□□ 0.05
CCR9P51686 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.38■□□□□ 0.05
CCR9P51686 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.38■□□□□ 0.05
CCR9P51686 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.38■□□□□ 0.05
CCR9P51686 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.38■□□□□ 0.05
CCR9P51686 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.38■□□□□ 0.05
CCR9P51686 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.38■□□□□ 0.05
CCR9P51686 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCR9P51686 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 AC060834.1-201ENST00000443027 2032 ntBASIC15.38■□□□□ 0.05
CCR9P51686 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCR9P51686 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCR9P51686 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCR9P51686 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCR9P51686 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.37■□□□□ 0.05
CCR9P51686 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.37■□□□□ 0.05
CCR9P51686 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCR9P51686 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCR9P51686 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCR9P51686 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCR9P51686 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCR9P51686 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CCR9P51686 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCR9P51686 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
CCR9P51686 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCR9P51686 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.37■□□□□ 0.05
CCR9P51686 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.37■□□□□ 0.05
CCR9P51686 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms