Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA4P51532 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA4P51532 AC009118.2-201ENST00000613275 655 ntBASIC30.81■■■□□ 2.52
SMARCA4P51532 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA4P51532 STK4-201ENST00000372801 2038 ntTSL 2 BASIC30.81■■■□□ 2.52
SMARCA4P51532 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SMARCA4P51532 SLC22A20-204ENST00000530038 1673 ntBASIC30.81■■■□□ 2.52
SMARCA4P51532 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SMARCA4P51532 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC30.8■■■□□ 2.52
SMARCA4P51532 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC30.8■■■□□ 2.52
SMARCA4P51532 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC30.8■■■□□ 2.52
SMARCA4P51532 MNT-208ENST00000575394 606 ntTSL 4 BASIC30.8■■■□□ 2.52
SMARCA4P51532 AL662799.1-202ENST00000614205 422 ntBASIC30.8■■■□□ 2.52
SMARCA4P51532 AC073592.8-201ENST00000624126 511 ntBASIC30.8■■■□□ 2.52
SMARCA4P51532 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC30.8■■■□□ 2.52
SMARCA4P51532 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC30.8■■■□□ 2.52
SMARCA4P51532 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA4P51532 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA4P51532 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA4P51532 AC012569.1-201ENST00000591191 1524 ntBASIC30.8■■■□□ 2.52
SMARCA4P51532 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA4P51532 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA4P51532 AC142381.1-201ENST00000426099 345 ntBASIC30.8■■■□□ 2.52
SMARCA4P51532 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC30.8■■■□□ 2.52
SMARCA4P51532 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
SMARCA4P51532 MTRF1LP2-201ENST00000506027 1122 ntBASIC30.8■■■□□ 2.52
SMARCA4P51532 AL358472.5-202ENST00000641448 1267 ntBASIC30.8■■■□□ 2.52
SMARCA4P51532 LINC00304-203ENST00000565008 1864 ntBASIC30.8■■■□□ 2.52
SMARCA4P51532 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMARCA4P51532 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA4P51532 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC30.79■■■□□ 2.52
SMARCA4P51532 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA4P51532 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
SMARCA4P51532 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA4P51532 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA4P51532 SATB1-217ENST00000493952 626 ntTSL 3 BASIC30.79■■■□□ 2.52
SMARCA4P51532 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC30.79■■■□□ 2.52
SMARCA4P51532 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC30.79■■■□□ 2.52
SMARCA4P51532 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC30.79■■■□□ 2.52
SMARCA4P51532 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC30.79■■■□□ 2.52
SMARCA4P51532 AC022144.1-201ENST00000602255 1580 ntBASIC30.79■■■□□ 2.52
SMARCA4P51532 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC30.79■■■□□ 2.52
SMARCA4P51532 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA4P51532 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA4P51532 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA4P51532 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA4P51532 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA4P51532 MIR346-201ENST00000362234 95 ntBASIC30.78■■■□□ 2.52
SMARCA4P51532 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC30.78■■■□□ 2.52
SMARCA4P51532 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC30.78■■■□□ 2.52
SMARCA4P51532 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC30.78■■■□□ 2.52
SMARCA4P51532 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC30.78■■■□□ 2.52
SMARCA4P51532 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA4P51532 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA4P51532 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA4P51532 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SMARCA4P51532 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC30.77■■■□□ 2.52
SMARCA4P51532 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA4P51532 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA4P51532 SPTLC1P1-201ENST00000447199 261 ntBASIC30.77■■■□□ 2.52
SMARCA4P51532 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
SMARCA4P51532 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
SMARCA4P51532 AC027307.2-201ENST00000591252 911 ntBASIC30.77■■■□□ 2.52
SMARCA4P51532 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC30.77■■■□□ 2.52
SMARCA4P51532 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA4P51532 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA4P51532 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA4P51532 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA4P51532 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA4P51532 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SMARCA4P51532 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
SMARCA4P51532 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
SMARCA4P51532 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC30.76■■■□□ 2.52
SMARCA4P51532 AL353732.1-201ENST00000569618 1459 ntBASIC30.76■■■□□ 2.52
SMARCA4P51532 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SMARCA4P51532 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
SMARCA4P51532 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SMARCA4P51532 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
SMARCA4P51532 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
SMARCA4P51532 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SMARCA4P51532 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
SMARCA4P51532 HCG4-201ENST00000418983 998 ntBASIC30.76■■■□□ 2.51
SMARCA4P51532 U91328.1-201ENST00000437528 223 ntBASIC30.76■■■□□ 2.51
SMARCA4P51532 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SMARCA4P51532 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
SMARCA4P51532 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC30.76■■■□□ 2.51
SMARCA4P51532 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC30.76■■■□□ 2.51
SMARCA4P51532 COQ4-205ENST00000609948 956 ntTSL 2 BASIC30.76■■■□□ 2.51
SMARCA4P51532 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC30.75■■■□□ 2.51
SMARCA4P51532 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SMARCA4P51532 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC30.75■■■□□ 2.51
SMARCA4P51532 NARF-206ENST00000457415 1668 ntTSL 5 BASIC30.75■■■□□ 2.51
SMARCA4P51532 AC016027.1-202ENST00000607927 1699 ntBASIC30.75■■■□□ 2.51
SMARCA4P51532 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC30.75■■■□□ 2.51
SMARCA4P51532 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SMARCA4P51532 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SMARCA4P51532 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC30.75■■■□□ 2.51
SMARCA4P51532 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SMARCA4P51532 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
SMARCA4P51532 AL590560.3-201ENST00000623350 461 ntBASIC30.75■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms