Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.51■□□□□ 0.87
NEDD4P46934 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4P46934 AC108860.2-201ENST00000562760 2183 ntBASIC20.5■□□□□ 0.87
NEDD4P46934 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4P46934 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4P46934 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.5■□□□□ 0.87
NEDD4P46934 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.5■□□□□ 0.87
NEDD4P46934 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4P46934 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NEDD4P46934 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.5■□□□□ 0.87
NEDD4P46934 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4P46934 AL031284.1-201ENST00000419297 478 ntBASIC20.5■□□□□ 0.87
NEDD4P46934 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
NEDD4P46934 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.5■□□□□ 0.87
NEDD4P46934 OR7E14P-202ENST00000530490 1290 ntBASIC20.5■□□□□ 0.87
NEDD4P46934 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.5■□□□□ 0.87
NEDD4P46934 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.5■□□□□ 0.87
NEDD4P46934 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.5■□□□□ 0.87
NEDD4P46934 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
NEDD4P46934 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NEDD4P46934 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NEDD4P46934 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.49■□□□□ 0.87
NEDD4P46934 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.49■□□□□ 0.87
NEDD4P46934 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
NEDD4P46934 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.49■□□□□ 0.87
NEDD4P46934 ELK2BP-201ENST00000415014 1224 ntBASIC20.49■□□□□ 0.87
NEDD4P46934 LAGE3P1-201ENST00000425356 484 ntBASIC20.49■□□□□ 0.87
NEDD4P46934 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.49■□□□□ 0.87
NEDD4P46934 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.49■□□□□ 0.87
NEDD4P46934 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.49■□□□□ 0.87
NEDD4P46934 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.49■□□□□ 0.87
NEDD4P46934 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.49■□□□□ 0.87
NEDD4P46934 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4P46934 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.48■□□□□ 0.87
NEDD4P46934 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.48■□□□□ 0.87
NEDD4P46934 NCF1C-201ENST00000438382 1427 ntBASIC20.48■□□□□ 0.87
NEDD4P46934 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEDD4P46934 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEDD4P46934 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEDD4P46934 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEDD4P46934 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEDD4P46934 AC243591.1-201ENST00000452967 1364 ntBASIC20.48■□□□□ 0.87
NEDD4P46934 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEDD4P46934 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEDD4P46934 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.48■□□□□ 0.87
NEDD4P46934 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.48■□□□□ 0.87
NEDD4P46934 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.48■□□□□ 0.87
NEDD4P46934 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.48■□□□□ 0.87
NEDD4P46934 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.48■□□□□ 0.87
NEDD4P46934 AL589182.2-201ENST00000619332 1049 ntBASIC20.48■□□□□ 0.87
NEDD4P46934 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NEDD4P46934 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.48■□□□□ 0.87
NEDD4P46934 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.48■□□□□ 0.87
NEDD4P46934 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.48■□□□□ 0.87
NEDD4P46934 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NEDD4P46934 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.47■□□□□ 0.87
NEDD4P46934 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NEDD4P46934 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.47■□□□□ 0.87
NEDD4P46934 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.47■□□□□ 0.87
NEDD4P46934 ACTG1P4-201ENST00000425123 1122 ntBASIC20.47■□□□□ 0.87
NEDD4P46934 KRT18P27-201ENST00000427733 1299 ntBASIC20.47■□□□□ 0.87
NEDD4P46934 AL662844.1-201ENST00000546340 181 ntBASIC20.47■□□□□ 0.87
NEDD4P46934 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.47■□□□□ 0.87
NEDD4P46934 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.47■□□□□ 0.87
NEDD4P46934 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.47■□□□□ 0.87
NEDD4P46934 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NEDD4P46934 AC004706.3-202ENST00000621574 984 ntBASIC20.47■□□□□ 0.87
NEDD4P46934 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEDD4P46934 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
NEDD4P46934 AC116353.5-201ENST00000638148 1699 ntBASIC20.47■□□□□ 0.87
NEDD4P46934 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.47■□□□□ 0.87
NEDD4P46934 AC080080.1-201ENST00000625121 2420 ntBASIC20.47■□□□□ 0.87
NEDD4P46934 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms