Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC1A3P43003 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A3P43003 KRT18P1-202ENST00000452408 1331 ntBASIC16.07■□□□□ 0.16
SLC1A3P43003 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A3P43003 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SLC1A3P43003 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC1A3P43003 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC1A3P43003 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A3P43003 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC1A3P43003 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC1A3P43003 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC1A3P43003 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A3P43003 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SLC1A3P43003 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A3P43003 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A3P43003 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC1A3P43003 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC1A3P43003 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SLC1A3P43003 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A3P43003 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A3P43003 AC005336.2-201ENST00000593183 939 ntBASIC16.06■□□□□ 0.16
SLC1A3P43003 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A3P43003 AC091076.1-201ENST00000610741 619 ntBASIC16.06■□□□□ 0.16
SLC1A3P43003 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLC1A3P43003 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLC1A3P43003 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLC1A3P43003 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A3P43003 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A3P43003 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC1A3P43003 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A3P43003 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC1A3P43003 DRAXINP1-201ENST00000437611 948 ntBASIC16.05■□□□□ 0.16
SLC1A3P43003 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC1A3P43003 AC002558.1-201ENST00000488906 803 ntBASIC16.05■□□□□ 0.16
SLC1A3P43003 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A3P43003 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.05■□□□□ 0.16
SLC1A3P43003 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC1A3P43003 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.05■□□□□ 0.16
SLC1A3P43003 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A3P43003 AL358472.4-201ENST00000633140 710 ntBASIC16.05■□□□□ 0.16
SLC1A3P43003 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A3P43003 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A3P43003 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC1A3P43003 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC1A3P43003 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC1A3P43003 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A3P43003 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A3P43003 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A3P43003 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A3P43003 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SLC1A3P43003 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC1A3P43003 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC1A3P43003 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC1A3P43003 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms