Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
GRIK1P39086 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
GRIK1P39086 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
GRIK1P39086 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.39■□□□□ 0.53
GRIK1P39086 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.39■□□□□ 0.53
GRIK1P39086 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GRIK1P39086 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GRIK1P39086 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
GRIK1P39086 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GRIK1P39086 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
GRIK1P39086 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
GRIK1P39086 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GRIK1P39086 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 AL355312.1-201ENST00000407115 2176 ntBASIC18.38■□□□□ 0.53
GRIK1P39086 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GRIK1P39086 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GRIK1P39086 LINC00304-203ENST00000565008 1864 ntBASIC18.38■□□□□ 0.53
GRIK1P39086 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GRIK1P39086 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.38■□□□□ 0.53
GRIK1P39086 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GRIK1P39086 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.38■□□□□ 0.53
GRIK1P39086 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.38■□□□□ 0.53
GRIK1P39086 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.38■□□□□ 0.53
GRIK1P39086 AC004706.3-202ENST00000621574 984 ntBASIC18.38■□□□□ 0.53
GRIK1P39086 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.38■□□□□ 0.53
GRIK1P39086 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.38■□□□□ 0.53
GRIK1P39086 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GRIK1P39086 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
GRIK1P39086 AC104109.2-201ENST00000602919 1418 ntBASIC18.38■□□□□ 0.53
GRIK1P39086 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
GRIK1P39086 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.38■□□□□ 0.53
GRIK1P39086 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.38■□□□□ 0.53
GRIK1P39086 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GRIK1P39086 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.37■□□□□ 0.53
GRIK1P39086 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
GRIK1P39086 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.37■□□□□ 0.53
GRIK1P39086 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.37■□□□□ 0.53
GRIK1P39086 AC008764.6-201ENST00000595909 2069 ntBASIC18.37■□□□□ 0.53
GRIK1P39086 AC018470.1-201ENST00000624790 3129 ntBASIC18.37■□□□□ 0.53
GRIK1P39086 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.37■□□□□ 0.53
GRIK1P39086 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.37■□□□□ 0.53
GRIK1P39086 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.37■□□□□ 0.53
GRIK1P39086 KRT18P27-201ENST00000427733 1299 ntBASIC18.37■□□□□ 0.53
GRIK1P39086 RNA5SP415-201ENST00000517246 115 ntBASIC18.37■□□□□ 0.53
GRIK1P39086 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.37■□□□□ 0.53
GRIK1P39086 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.37■□□□□ 0.53
GRIK1P39086 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.37■□□□□ 0.53
GRIK1P39086 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.37■□□□□ 0.53
GRIK1P39086 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
GRIK1P39086 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GRIK1P39086 AL139327.4-201ENST00000612362 153 ntBASIC18.37■□□□□ 0.53
GRIK1P39086 AC117500.6-201ENST00000624871 588 ntBASIC18.37■□□□□ 0.53
GRIK1P39086 AC005593.1-201ENST00000624894 515 ntBASIC18.37■□□□□ 0.53
GRIK1P39086 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.37■□□□□ 0.53
GRIK1P39086 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
GRIK1P39086 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 AC046185.3-201ENST00000623228 1824 ntBASIC18.37■□□□□ 0.53
GRIK1P39086 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.37■□□□□ 0.53
GRIK1P39086 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GRIK1P39086 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.37■□□□□ 0.53
GRIK1P39086 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GRIK1P39086 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.37■□□□□ 0.53
GRIK1P39086 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.36■□□□□ 0.53
GRIK1P39086 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 MIR574-201ENST00000385209 96 ntBASIC18.36■□□□□ 0.53
GRIK1P39086 AC073621.1-201ENST00000392730 636 ntBASIC18.36■□□□□ 0.53
GRIK1P39086 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.36■□□□□ 0.53
GRIK1P39086 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms