Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFSF4P23510 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFSF4P23510 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFSF4P23510 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.95□□□□□ -0.02
TNFSF4P23510 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFSF4P23510 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFSF4P23510 AC109462.3-201ENST00000573934 613 ntBASIC14.95□□□□□ -0.02
TNFSF4P23510 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFSF4P23510 REXO1L6P-202ENST00000619970 1078 ntBASIC14.95□□□□□ -0.02
TNFSF4P23510 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFSF4P23510 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TNFSF4P23510 SIRPAP1-201ENST00000448467 1770 ntBASIC14.95□□□□□ -0.02
TNFSF4P23510 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFSF4P23510 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFSF4P23510 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TNFSF4P23510 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TNFSF4P23510 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TNFSF4P23510 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.94□□□□□ -0.02
TNFSF4P23510 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
TNFSF4P23510 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
TNFSF4P23510 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.94□□□□□ -0.02
TNFSF4P23510 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.94□□□□□ -0.02
TNFSF4P23510 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.94□□□□□ -0.02
TNFSF4P23510 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.94□□□□□ -0.02
TNFSF4P23510 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.94□□□□□ -0.02
TNFSF4P23510 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 AC008608.2-201ENST00000606089 416 ntBASIC14.94□□□□□ -0.02
TNFSF4P23510 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.94□□□□□ -0.02
TNFSF4P23510 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.94□□□□□ -0.02
TNFSF4P23510 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TNFSF4P23510 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 AC007613.1-201ENST00000572811 2597 ntBASIC14.94□□□□□ -0.02
TNFSF4P23510 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TNFSF4P23510 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFSF4P23510 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFSF4P23510 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TNFSF4P23510 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TNFSF4P23510 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFSF4P23510 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFSF4P23510 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 AC008764.6-201ENST00000595909 2069 ntBASIC14.93□□□□□ -0.02
TNFSF4P23510 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFSF4P23510 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFSF4P23510 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 AC003669.1-201ENST00000334569 611 ntBASIC14.93□□□□□ -0.02
TNFSF4P23510 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 KLF4P1-201ENST00000412782 1185 ntBASIC14.93□□□□□ -0.02
TNFSF4P23510 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.93□□□□□ -0.02
TNFSF4P23510 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.93□□□□□ -0.02
TNFSF4P23510 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.93□□□□□ -0.02
TNFSF4P23510 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TNFSF4P23510 RN7SL510P-201ENST00000581311 263 ntBASIC14.93□□□□□ -0.02
TNFSF4P23510 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.93□□□□□ -0.02
TNFSF4P23510 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 AC073592.5-201ENST00000624854 528 ntBASIC14.93□□□□□ -0.02
TNFSF4P23510 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.93□□□□□ -0.02
TNFSF4P23510 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TNFSF4P23510 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TNFSF4P23510 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms