Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN1P18031 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPN1P18031 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN1P18031 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN1P18031 AC006557.2-201ENST00000592985 1240 ntBASIC18.46■□□□□ 0.55
PTPN1P18031 AC004706.3-202ENST00000621574 984 ntBASIC18.46■□□□□ 0.55
PTPN1P18031 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN1P18031 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PTPN1P18031 AL135999.2-201ENST00000622438 1686 ntBASIC18.46■□□□□ 0.55
PTPN1P18031 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
PTPN1P18031 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN1P18031 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PTPN1P18031 IL9RP2-201ENST00000423948 1312 ntBASIC18.46■□□□□ 0.55
PTPN1P18031 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.46■□□□□ 0.54
PTPN1P18031 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN1P18031 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTPN1P18031 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN1P18031 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPN1P18031 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPN1P18031 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPN1P18031 LINC00982-205ENST00000420957 435 ntBASIC18.45■□□□□ 0.54
PTPN1P18031 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPN1P18031 AC092910.1-201ENST00000482027 1129 ntBASIC18.45■□□□□ 0.54
PTPN1P18031 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPN1P18031 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPN1P18031 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
PTPN1P18031 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PTPN1P18031 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
PTPN1P18031 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
PTPN1P18031 AP002414.3-201ENST00000589352 1468 ntBASIC18.45■□□□□ 0.54
PTPN1P18031 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN1P18031 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN1P18031 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PTPN1P18031 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN1P18031 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PTPN1P18031 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 KRT18P27-201ENST00000427733 1299 ntBASIC18.44■□□□□ 0.54
PTPN1P18031 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN1P18031 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN1P18031 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN1P18031 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN1P18031 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN1P18031 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN1P18031 AC120114.3-201ENST00000611923 658 ntBASIC18.44■□□□□ 0.54
PTPN1P18031 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN1P18031 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN1P18031 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PTPN1P18031 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PTPN1P18031 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN1P18031 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN1P18031 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN1P18031 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN1P18031 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN1P18031 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN1P18031 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN1P18031 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN1P18031 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN1P18031 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN1P18031 AC073621.1-201ENST00000392730 636 ntBASIC18.43■□□□□ 0.54
PTPN1P18031 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.43■□□□□ 0.54
PTPN1P18031 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.43■□□□□ 0.54
PTPN1P18031 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.43■□□□□ 0.54
PTPN1P18031 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PTPN1P18031 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN1P18031 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
PTPN1P18031 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN1P18031 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.43■□□□□ 0.54
PTPN1P18031 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN1P18031 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN1P18031 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
PTPN1P18031 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN1P18031 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN1P18031 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN1P18031 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN1P18031 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms