Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRKCAP17252 KRT18P1-202ENST00000452408 1331 ntBASIC16.2■□□□□ 0.18
PRKCAP17252 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.2■□□□□ 0.18
PRKCAP17252 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.2■□□□□ 0.18
PRKCAP17252 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.2■□□□□ 0.18
PRKCAP17252 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.2■□□□□ 0.18
PRKCAP17252 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRKCAP17252 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRKCAP17252 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PRKCAP17252 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.2■□□□□ 0.18
PRKCAP17252 AC011840.4-201ENST00000578471 627 ntBASIC16.2■□□□□ 0.18
PRKCAP17252 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.2■□□□□ 0.18
PRKCAP17252 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.2■□□□□ 0.18
PRKCAP17252 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRKCAP17252 AC006116.8-202ENST00000587620 1550 ntBASIC16.2■□□□□ 0.18
PRKCAP17252 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
PRKCAP17252 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.2■□□□□ 0.18
PRKCAP17252 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRKCAP17252 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.19■□□□□ 0.18
PRKCAP17252 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRKCAP17252 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.19■□□□□ 0.18
PRKCAP17252 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRKCAP17252 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRKCAP17252 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
PRKCAP17252 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRKCAP17252 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.19■□□□□ 0.18
PRKCAP17252 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.19■□□□□ 0.18
PRKCAP17252 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.19■□□□□ 0.18
PRKCAP17252 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.19■□□□□ 0.18
PRKCAP17252 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.19■□□□□ 0.18
PRKCAP17252 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRKCAP17252 DRAXINP1-201ENST00000437611 948 ntBASIC16.19■□□□□ 0.18
PRKCAP17252 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.19■□□□□ 0.18
PRKCAP17252 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.19■□□□□ 0.18
PRKCAP17252 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRKCAP17252 AP002414.4-201ENST00000589764 1148 ntBASIC16.19■□□□□ 0.18
PRKCAP17252 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.19■□□□□ 0.18
PRKCAP17252 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PRKCAP17252 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 AC009949.1-201ENST00000623048 1830 ntBASIC16.19■□□□□ 0.18
PRKCAP17252 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
PRKCAP17252 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRKCAP17252 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
PRKCAP17252 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.18■□□□□ 0.18
PRKCAP17252 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.18■□□□□ 0.18
PRKCAP17252 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 AC246785.2-201ENST00000432512 513 ntBASIC16.18■□□□□ 0.18
PRKCAP17252 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.18■□□□□ 0.18
PRKCAP17252 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.18■□□□□ 0.18
PRKCAP17252 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 TPSP2-201ENST00000561760 610 ntBASIC16.18■□□□□ 0.18
PRKCAP17252 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms