Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH1P12830 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 AC011676.5-201ENST00000624864 2660 ntBASIC17.03■□□□□ 0.32
CDH1P12830 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
CDH1P12830 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH1P12830 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH1P12830 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH1P12830 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH1P12830 AC009533.2-201ENST00000543664 586 ntBASIC17.03■□□□□ 0.32
CDH1P12830 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH1P12830 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH1P12830 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH1P12830 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH1P12830 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH1P12830 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH1P12830 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH1P12830 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH1P12830 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDH1P12830 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH1P12830 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH1P12830 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CDH1P12830 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH1P12830 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH1P12830 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDH1P12830 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH1P12830 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDH1P12830 AL138688.1-201ENST00000624851 1594 ntBASIC17.02■□□□□ 0.32
CDH1P12830 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH1P12830 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDH1P12830 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH1P12830 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH1P12830 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH1P12830 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH1P12830 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH1P12830 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDH1P12830 TP73-AS1-210ENST00000637775 1455 ntBASIC17.02■□□□□ 0.32
CDH1P12830 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDH1P12830 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH1P12830 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH1P12830 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH1P12830 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDH1P12830 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CDH1P12830 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH1P12830 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CDH1P12830 BNIP3P18-201ENST00000593976 575 ntBASIC17.02■□□□□ 0.32
CDH1P12830 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CDH1P12830 AC099336.1-202ENST00000602961 463 ntBASIC17.02■□□□□ 0.32
CDH1P12830 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
CDH1P12830 LINC01451-201ENST00000623792 534 ntBASIC17.02■□□□□ 0.32
CDH1P12830 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH1P12830 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH1P12830 HLA-J-201ENST00000462773 1622 ntBASIC17.02■□□□□ 0.31
CDH1P12830 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CDH1P12830 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH1P12830 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.02■□□□□ 0.31
CDH1P12830 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CDH1P12830 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH1P12830 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.02■□□□□ 0.31
CDH1P12830 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH1P12830 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH1P12830 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH1P12830 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH1P12830 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH1P12830 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH1P12830 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH1P12830 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDH1P12830 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH1P12830 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CDH1P12830 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH1P12830 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH1P12830 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH1P12830 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH1P12830 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDH1P12830 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDH1P12830 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH1P12830 FAM220CP-201ENST00000395253 831 ntBASIC17.01■□□□□ 0.31
CDH1P12830 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH1P12830 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH1P12830 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH1P12830 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH1P12830 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms