Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
TOP2AP11388 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
TOP2AP11388 MIR943-201ENST00000401286 94 ntBASIC30.16■■■□□ 2.42
TOP2AP11388 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
TOP2AP11388 AC015922.1-201ENST00000421102 1152 ntBASIC30.16■■■□□ 2.42
TOP2AP11388 PPP6R2P1-201ENST00000450880 1275 ntBASIC30.16■■■□□ 2.42
TOP2AP11388 AC190387.1-201ENST00000551683 408 ntBASIC30.16■■■□□ 2.42
TOP2AP11388 KRT8P23-201ENST00000560090 1207 ntBASIC30.16■■■□□ 2.42
TOP2AP11388 SSH2-211ENST00000590153 570 ntTSL 4 BASIC30.16■■■□□ 2.42
TOP2AP11388 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC30.16■■■□□ 2.42
TOP2AP11388 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC30.16■■■□□ 2.42
TOP2AP11388 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
TOP2AP11388 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
TOP2AP11388 AC008677.1-201ENST00000519230 1561 ntBASIC30.15■■■□□ 2.42
TOP2AP11388 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
TOP2AP11388 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
TOP2AP11388 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
TOP2AP11388 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC30.15■■■□□ 2.42
TOP2AP11388 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC30.15■■■□□ 2.42
TOP2AP11388 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
TOP2AP11388 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TOP2AP11388 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
TOP2AP11388 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC30.15■■■□□ 2.42
TOP2AP11388 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
TOP2AP11388 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC30.15■■■□□ 2.42
TOP2AP11388 AL035252.4-201ENST00000624174 288 ntBASIC30.15■■■□□ 2.42
TOP2AP11388 WASH6P-202ENST00000359512 1437 ntBASIC30.15■■■□□ 2.42
TOP2AP11388 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TOP2AP11388 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
TOP2AP11388 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TOP2AP11388 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC30.14■■■□□ 2.42
TOP2AP11388 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC30.14■■■□□ 2.42
TOP2AP11388 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC30.14■■■□□ 2.42
TOP2AP11388 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TOP2AP11388 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TOP2AP11388 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
TOP2AP11388 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC30.14■■■□□ 2.42
TOP2AP11388 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC30.14■■■□□ 2.42
TOP2AP11388 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
TOP2AP11388 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
TOP2AP11388 GNAS-203ENST00000306120 1878 ntBASIC30.14■■■□□ 2.42
TOP2AP11388 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC30.14■■■□□ 2.41
TOP2AP11388 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.41
TOP2AP11388 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.41
TOP2AP11388 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC30.13■■■□□ 2.41
TOP2AP11388 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
TOP2AP11388 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TOP2AP11388 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
TOP2AP11388 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
TOP2AP11388 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TOP2AP11388 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC30.13■■■□□ 2.41
TOP2AP11388 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC30.13■■■□□ 2.41
TOP2AP11388 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC30.13■■■□□ 2.41
TOP2AP11388 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC30.13■■■□□ 2.41
TOP2AP11388 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
TOP2AP11388 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC30.13■■■□□ 2.41
TOP2AP11388 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TOP2AP11388 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC30.12■■■□□ 2.41
TOP2AP11388 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TOP2AP11388 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TOP2AP11388 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC30.12■■■□□ 2.41
TOP2AP11388 BASP1P1-201ENST00000430708 665 ntBASIC30.12■■■□□ 2.41
TOP2AP11388 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC30.12■■■□□ 2.41
TOP2AP11388 MIR6080-201ENST00000617359 66 ntBASIC30.12■■■□□ 2.41
TOP2AP11388 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC30.12■■■□□ 2.41
TOP2AP11388 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC30.12■■■□□ 2.41
TOP2AP11388 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
TOP2AP11388 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC30.12■■■□□ 2.41
TOP2AP11388 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC30.12■■■□□ 2.41
TOP2AP11388 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
TOP2AP11388 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC30.12■■■□□ 2.41
TOP2AP11388 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
TOP2AP11388 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TOP2AP11388 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TOP2AP11388 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TOP2AP11388 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
TOP2AP11388 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
TOP2AP11388 METTL26-204ENST00000397665 558 ntTSL 2 BASIC30.12■■■□□ 2.41
TOP2AP11388 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC30.12■■■□□ 2.41
TOP2AP11388 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
TOP2AP11388 AC005225.4-201ENST00000557330 545 ntBASIC30.12■■■□□ 2.41
TOP2AP11388 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC30.11■■■□□ 2.41
TOP2AP11388 AL353732.1-201ENST00000569618 1459 ntBASIC30.11■■■□□ 2.41
TOP2AP11388 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TOP2AP11388 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
TOP2AP11388 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TOP2AP11388 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TOP2AP11388 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC30.11■■■□□ 2.41
TOP2AP11388 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TOP2AP11388 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
TOP2AP11388 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
TOP2AP11388 HCG4-201ENST00000418983 998 ntBASIC30.11■■■□□ 2.41
TOP2AP11388 MTRF1LP2-201ENST00000506027 1122 ntBASIC30.11■■■□□ 2.41
TOP2AP11388 SLC25A39P2-201ENST00000537614 270 ntBASIC30.11■■■□□ 2.41
TOP2AP11388 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TOP2AP11388 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TOP2AP11388 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TOP2AP11388 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC30.1■■■□□ 2.41
TOP2AP11388 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
TOP2AP11388 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms