Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SP9P0CG40 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17■□□□□ 0.31
SP9P0CG40 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17■□□□□ 0.31
SP9P0CG40 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SP9P0CG40 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17■□□□□ 0.31
SP9P0CG40 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SP9P0CG40 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SP9P0CG40 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.99■□□□□ 0.31
SP9P0CG40 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.99■□□□□ 0.31
SP9P0CG40 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
SP9P0CG40 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.99■□□□□ 0.31
SP9P0CG40 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.99■□□□□ 0.31
SP9P0CG40 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.99■□□□□ 0.31
SP9P0CG40 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.99■□□□□ 0.31
SP9P0CG40 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.99■□□□□ 0.31
SP9P0CG40 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.99■□□□□ 0.31
SP9P0CG40 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.99■□□□□ 0.31
SP9P0CG40 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.99■□□□□ 0.31
SP9P0CG40 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SP9P0CG40 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.99■□□□□ 0.31
SP9P0CG40 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SP9P0CG40 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.99■□□□□ 0.31
SP9P0CG40 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.99■□□□□ 0.31
SP9P0CG40 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SP9P0CG40 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SP9P0CG40 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.98■□□□□ 0.31
SP9P0CG40 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SP9P0CG40 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.98■□□□□ 0.31
SP9P0CG40 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.98■□□□□ 0.31
SP9P0CG40 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.98■□□□□ 0.31
SP9P0CG40 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.98■□□□□ 0.31
SP9P0CG40 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SP9P0CG40 AC012569.1-201ENST00000591191 1524 ntBASIC16.98■□□□□ 0.31
SP9P0CG40 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
SP9P0CG40 AC098614.1-201ENST00000368528 745 ntBASIC16.98■□□□□ 0.31
SP9P0CG40 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.98■□□□□ 0.31
SP9P0CG40 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.98■□□□□ 0.31
SP9P0CG40 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SP9P0CG40 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.98■□□□□ 0.31
SP9P0CG40 AC084346.2-201ENST00000607097 949 ntBASIC16.98■□□□□ 0.31
SP9P0CG40 SPDYE12P-201ENST00000618416 771 ntBASIC16.98■□□□□ 0.31
SP9P0CG40 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.98■□□□□ 0.31
SP9P0CG40 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SP9P0CG40 AC046185.3-201ENST00000623228 1824 ntBASIC16.98■□□□□ 0.31
SP9P0CG40 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.98■□□□□ 0.31
SP9P0CG40 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SP9P0CG40 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SP9P0CG40 AFG3L1P-217ENST00000557444 2447 ntBASIC16.97■□□□□ 0.31
SP9P0CG40 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SP9P0CG40 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.97■□□□□ 0.31
SP9P0CG40 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SP9P0CG40 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SP9P0CG40 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SP9P0CG40 MIR1909-201ENST00000411312 80 ntBASIC16.97■□□□□ 0.31
SP9P0CG40 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.97■□□□□ 0.31
SP9P0CG40 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.97■□□□□ 0.31
SP9P0CG40 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.97■□□□□ 0.31
SP9P0CG40 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.97■□□□□ 0.31
SP9P0CG40 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SP9P0CG40 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.97■□□□□ 0.31
SP9P0CG40 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.97■□□□□ 0.31
SP9P0CG40 AC005412.3-201ENST00000580309 715 ntBASIC16.97■□□□□ 0.31
SP9P0CG40 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.97■□□□□ 0.31
SP9P0CG40 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SP9P0CG40 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.97■□□□□ 0.31
SP9P0CG40 AC007541.1-201ENST00000570282 1469 ntBASIC16.97■□□□□ 0.31
SP9P0CG40 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SP9P0CG40 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.97■□□□□ 0.31
SP9P0CG40 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SP9P0CG40 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.97■□□□□ 0.31
SP9P0CG40 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.96■□□□□ 0.31
SP9P0CG40 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SP9P0CG40 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms