Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.33■■□□□ 1.33
NEFMP07197 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.33■■□□□ 1.33
NEFMP07197 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
NEFMP07197 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
NEFMP07197 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
NEFMP07197 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
NEFMP07197 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NEFMP07197 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC23.33■■□□□ 1.32
NEFMP07197 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
NEFMP07197 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.33■■□□□ 1.32
NEFMP07197 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC23.32■■□□□ 1.32
NEFMP07197 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC23.32■■□□□ 1.32
NEFMP07197 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC23.32■■□□□ 1.32
NEFMP07197 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC23.32■■□□□ 1.32
NEFMP07197 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NEFMP07197 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.32■■□□□ 1.32
NEFMP07197 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NEFMP07197 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEFMP07197 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEFMP07197 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.32■■□□□ 1.32
NEFMP07197 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NEFMP07197 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
NEFMP07197 AD001527.2-201ENST00000622994 785 ntBASIC23.32■■□□□ 1.32
NEFMP07197 AP000867.4-201ENST00000641616 219 ntBASIC23.32■■□□□ 1.32
NEFMP07197 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC23.32■■□□□ 1.32
NEFMP07197 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEFMP07197 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.32■■□□□ 1.32
NEFMP07197 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEFMP07197 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23.32■■□□□ 1.32
NEFMP07197 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEFMP07197 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEFMP07197 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC23.32■■□□□ 1.32
NEFMP07197 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEFMP07197 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC23.32■■□□□ 1.32
NEFMP07197 KRT8P10-201ENST00000450021 1447 ntBASIC23.32■■□□□ 1.32
NEFMP07197 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
NEFMP07197 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
NEFMP07197 PXK-206ENST00000463280 2825 ntTSL 2 BASIC23.32■■□□□ 1.32
NEFMP07197 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEFMP07197 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NEFMP07197 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NEFMP07197 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
NEFMP07197 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC23.31■■□□□ 1.32
NEFMP07197 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.31■■□□□ 1.32
NEFMP07197 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC23.31■■□□□ 1.32
NEFMP07197 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC23.31■■□□□ 1.32
NEFMP07197 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC23.31■■□□□ 1.32
NEFMP07197 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.31■■□□□ 1.32
NEFMP07197 AC109462.3-201ENST00000573934 613 ntBASIC23.31■■□□□ 1.32
NEFMP07197 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
NEFMP07197 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
NEFMP07197 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
NEFMP07197 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NEFMP07197 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC23.31■■□□□ 1.32
NEFMP07197 AL356309.3-201ENST00000624132 1934 ntBASIC23.31■■□□□ 1.32
NEFMP07197 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 TNRC18P3-201ENST00000441896 2691 ntBASIC23.31■■□□□ 1.32
NEFMP07197 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
NEFMP07197 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NEFMP07197 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC23.3■■□□□ 1.32
NEFMP07197 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC23.3■■□□□ 1.32
NEFMP07197 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC23.3■■□□□ 1.32
NEFMP07197 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.3■■□□□ 1.32
NEFMP07197 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.3■■□□□ 1.32
NEFMP07197 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 FAM197Y8-203ENST00000450145 560 ntBASIC23.3■■□□□ 1.32
NEFMP07197 FGFR3P6-201ENST00000457012 610 ntBASIC23.3■■□□□ 1.32
NEFMP07197 AF186996.4-201ENST00000467186 377 ntBASIC23.3■■□□□ 1.32
NEFMP07197 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.3■■□□□ 1.32
NEFMP07197 AC073648.2-201ENST00000510116 352 ntBASIC23.3■■□□□ 1.32
NEFMP07197 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 AL662844.1-201ENST00000546340 181 ntBASIC23.3■■□□□ 1.32
NEFMP07197 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 AC104692.2-201ENST00000603054 253 ntBASIC23.3■■□□□ 1.32
NEFMP07197 AL139288.1-201ENST00000623748 933 ntBASIC23.3■■□□□ 1.32
NEFMP07197 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
NEFMP07197 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC23.3■■□□□ 1.32
NEFMP07197 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC23.3■■□□□ 1.32
NEFMP07197 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC23.3■■□□□ 1.32
NEFMP07197 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEFMP07197 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
NEFMP07197 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
NEFMP07197 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms