Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC10.73□□□□□ -0.69
APOBP04114 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 AL512384.1-201ENST00000406683 331 ntBASIC10.73□□□□□ -0.69
APOBP04114 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.73□□□□□ -0.69
APOBP04114 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC10.73□□□□□ -0.69
APOBP04114 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC10.73□□□□□ -0.69
APOBP04114 AL645728.2-201ENST00000641974 660 ntBASIC10.73□□□□□ -0.69
APOBP04114 AC116562.4-201ENST00000641316 2276 ntBASIC10.73□□□□□ -0.69
APOBP04114 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
APOBP04114 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 STX3-203ENST00000529177 1571 ntTSL 2 BASIC10.73□□□□□ -0.69
APOBP04114 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
APOBP04114 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
APOBP04114 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.73□□□□□ -0.69
APOBP04114 MIR4259-201ENST00000584466 101 ntBASIC10.73□□□□□ -0.69
APOBP04114 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC10.73□□□□□ -0.69
APOBP04114 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.72□□□□□ -0.69
APOBP04114 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
APOBP04114 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
APOBP04114 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC10.72□□□□□ -0.69
APOBP04114 RASL12-203ENST00000434605 982 ntTSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 AC087163.2-201ENST00000457299 853 ntBASIC10.72□□□□□ -0.69
APOBP04114 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC10.72□□□□□ -0.69
APOBP04114 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC10.72□□□□□ -0.69
APOBP04114 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.72□□□□□ -0.69
APOBP04114 BANF1P1-201ENST00000553684 263 ntBASIC10.72□□□□□ -0.69
APOBP04114 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 AL138918.1-201ENST00000568306 659 ntBASIC10.72□□□□□ -0.69
APOBP04114 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
APOBP04114 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC10.72□□□□□ -0.69
APOBP04114 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
APOBP04114 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
APOBP04114 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 GNAQP1-201ENST00000444815 1067 ntBASIC10.72□□□□□ -0.69
APOBP04114 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 ORC6-206ENST00000568364 888 ntTSL 5 BASIC10.72□□□□□ -0.69
APOBP04114 MIR4453-201ENST00000584019 89 ntBASIC10.72□□□□□ -0.69
APOBP04114 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC10.72□□□□□ -0.69
APOBP04114 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC10.72□□□□□ -0.69
APOBP04114 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOBP04114 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
APOBP04114 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOBP04114 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
APOBP04114 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC10.71□□□□□ -0.69
APOBP04114 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC10.71□□□□□ -0.69
APOBP04114 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOBP04114 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
APOBP04114 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOBP04114 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOBP04114 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOBP04114 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOBP04114 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOBP04114 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.71□□□□□ -0.69
APOBP04114 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
APOBP04114 TEX28P1-201ENST00000613479 1221 ntBASIC10.71□□□□□ -0.69
APOBP04114 TEX28P2-201ENST00000617764 1221 ntBASIC10.71□□□□□ -0.69
APOBP04114 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
APOBP04114 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
APOBP04114 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
APOBP04114 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.71□□□□□ -0.69
APOBP04114 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOBP04114 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
APOBP04114 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms