Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL2A1P02458 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.16■□□□□ 0.82
COL2A1P02458 FAM86C2P-203ENST00000528684 1004 ntBASIC20.16■□□□□ 0.82
COL2A1P02458 MIR3909-201ENST00000579518 119 ntBASIC20.16■□□□□ 0.82
COL2A1P02458 AC015911.4-201ENST00000588022 1070 ntBASIC20.16■□□□□ 0.82
COL2A1P02458 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.16■□□□□ 0.82
COL2A1P02458 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL2A1P02458 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
COL2A1P02458 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.16■□□□□ 0.82
COL2A1P02458 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL2A1P02458 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.16■□□□□ 0.82
COL2A1P02458 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.16■□□□□ 0.82
COL2A1P02458 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL2A1P02458 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL2A1P02458 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
COL2A1P02458 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
COL2A1P02458 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.15■□□□□ 0.82
COL2A1P02458 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL2A1P02458 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.15■□□□□ 0.82
COL2A1P02458 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.15■□□□□ 0.82
COL2A1P02458 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
COL2A1P02458 AC109635.5-201ENST00000533593 962 ntBASIC20.15■□□□□ 0.82
COL2A1P02458 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
COL2A1P02458 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.15■□□□□ 0.82
COL2A1P02458 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.15■□□□□ 0.82
COL2A1P02458 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.15■□□□□ 0.82
COL2A1P02458 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL2A1P02458 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL2A1P02458 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
COL2A1P02458 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL2A1P02458 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL2A1P02458 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
COL2A1P02458 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL2A1P02458 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.14■□□□□ 0.82
COL2A1P02458 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.82
COL2A1P02458 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL2A1P02458 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.14■□□□□ 0.81
COL2A1P02458 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
COL2A1P02458 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.14■□□□□ 0.81
COL2A1P02458 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL2A1P02458 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL2A1P02458 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.14■□□□□ 0.81
COL2A1P02458 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL2A1P02458 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL2A1P02458 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL2A1P02458 HCG4-201ENST00000418983 998 ntBASIC20.14■□□□□ 0.81
COL2A1P02458 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.14■□□□□ 0.81
COL2A1P02458 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL2A1P02458 KRT8P48-201ENST00000515599 1220 ntBASIC20.14■□□□□ 0.81
COL2A1P02458 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
COL2A1P02458 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.14■□□□□ 0.81
COL2A1P02458 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
COL2A1P02458 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
COL2A1P02458 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL2A1P02458 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.14■□□□□ 0.81
COL2A1P02458 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL2A1P02458 RARRES2P8-201ENST00000566335 367 ntBASIC20.14■□□□□ 0.81
COL2A1P02458 AC091167.2-201ENST00000579581 588 ntBASIC20.14■□□□□ 0.81
COL2A1P02458 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
COL2A1P02458 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
COL2A1P02458 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.14■□□□□ 0.81
COL2A1P02458 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.14■□□□□ 0.81
COL2A1P02458 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL2A1P02458 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL2A1P02458 AKAP8P1-201ENST00000434743 1349 ntBASIC20.14■□□□□ 0.81
COL2A1P02458 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.14■□□□□ 0.81
COL2A1P02458 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
COL2A1P02458 AL353732.1-201ENST00000569618 1459 ntBASIC20.14■□□□□ 0.81
COL2A1P02458 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL2A1P02458 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL2A1P02458 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL2A1P02458 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL2A1P02458 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL2A1P02458 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL2A1P02458 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL2A1P02458 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL2A1P02458 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.13■□□□□ 0.81
COL2A1P02458 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
COL2A1P02458 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL2A1P02458 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL2A1P02458 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
COL2A1P02458 HMGA1P7-201ENST00000406908 502 ntBASIC20.13■□□□□ 0.81
COL2A1P02458 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL2A1P02458 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.13■□□□□ 0.81
COL2A1P02458 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.13■□□□□ 0.81
COL2A1P02458 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.13■□□□□ 0.81
COL2A1P02458 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms