Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RAPGEF3O95398 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC25.82■■□□□ 1.72
RAPGEF3O95398 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC25.82■■□□□ 1.72
RAPGEF3O95398 AC009477.1-201ENST00000452936 217 ntBASIC25.82■■□□□ 1.72
RAPGEF3O95398 INE1-201ENST00000456273 945 ntBASIC25.82■■□□□ 1.72
RAPGEF3O95398 ACA64.2-201ENST00000459014 129 ntBASIC25.82■■□□□ 1.72
RAPGEF3O95398 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RAPGEF3O95398 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RAPGEF3O95398 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC25.82■■□□□ 1.72
RAPGEF3O95398 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RAPGEF3O95398 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
RAPGEF3O95398 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RAPGEF3O95398 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
RAPGEF3O95398 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
RAPGEF3O95398 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RAPGEF3O95398 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF3O95398 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC25.81■■□□□ 1.72
RAPGEF3O95398 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF3O95398 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF3O95398 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
RAPGEF3O95398 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC25.81■■□□□ 1.72
RAPGEF3O95398 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF3O95398 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF3O95398 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
RAPGEF3O95398 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
RAPGEF3O95398 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC25.81■■□□□ 1.72
RAPGEF3O95398 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
RAPGEF3O95398 AC009407.1-201ENST00000568958 598 ntBASIC25.81■■□□□ 1.72
RAPGEF3O95398 NAA38-206ENST00000576384 424 ntTSL 2 BASIC25.81■■□□□ 1.72
RAPGEF3O95398 AC008738.7-201ENST00000609744 511 ntBASIC25.81■■□□□ 1.72
RAPGEF3O95398 Six3os1_5.1-201ENST00000611000 271 ntBASIC25.81■■□□□ 1.72
RAPGEF3O95398 SNX12-206ENST00000622259 661 ntTSL 5 BASIC25.81■■□□□ 1.72
RAPGEF3O95398 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF3O95398 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF3O95398 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF3O95398 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC25.81■■□□□ 1.72
RAPGEF3O95398 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RAPGEF3O95398 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC25.8■■□□□ 1.72
RAPGEF3O95398 AC007541.1-201ENST00000570282 1469 ntBASIC25.8■■□□□ 1.72
RAPGEF3O95398 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
RAPGEF3O95398 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 MXI1-205ENST00000393134 889 ntTSL 2 BASIC25.8■■□□□ 1.72
RAPGEF3O95398 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 NOP2-211ENST00000540228 668 ntTSL 2 BASIC25.8■■□□□ 1.72
RAPGEF3O95398 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC25.8■■□□□ 1.72
RAPGEF3O95398 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC25.8■■□□□ 1.72
RAPGEF3O95398 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC25.8■■□□□ 1.72
RAPGEF3O95398 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RAPGEF3O95398 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC25.79■■□□□ 1.72
RAPGEF3O95398 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RAPGEF3O95398 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.79■■□□□ 1.72
RAPGEF3O95398 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RAPGEF3O95398 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC25.79■■□□□ 1.72
RAPGEF3O95398 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC25.79■■□□□ 1.72
RAPGEF3O95398 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
RAPGEF3O95398 LY6E-204ENST00000519546 971 ntTSL 2 BASIC25.79■■□□□ 1.72
RAPGEF3O95398 AL162274.1-201ENST00000617191 1098 ntBASIC25.79■■□□□ 1.72
RAPGEF3O95398 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RAPGEF3O95398 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RAPGEF3O95398 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC25.79■■□□□ 1.72
RAPGEF3O95398 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RAPGEF3O95398 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
RAPGEF3O95398 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RAPGEF3O95398 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RAPGEF3O95398 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RAPGEF3O95398 AC012569.1-201ENST00000591191 1524 ntBASIC25.78■■□□□ 1.72
RAPGEF3O95398 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC25.78■■□□□ 1.72
RAPGEF3O95398 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
RAPGEF3O95398 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 DGCR5-201ENST00000399539 862 ntBASIC25.78■■□□□ 1.72
RAPGEF3O95398 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC25.78■■□□□ 1.72
RAPGEF3O95398 AC132938.2-201ENST00000579188 680 ntBASIC25.78■■□□□ 1.72
RAPGEF3O95398 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC25.78■■□□□ 1.72
RAPGEF3O95398 AL591163.1-201ENST00000641757 987 ntBASIC25.78■■□□□ 1.72
RAPGEF3O95398 AC073592.3-201ENST00000625118 1834 ntBASIC25.78■■□□□ 1.72
RAPGEF3O95398 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
RAPGEF3O95398 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RAPGEF3O95398 AC116562.4-201ENST00000641316 2276 ntBASIC25.77■■□□□ 1.72
RAPGEF3O95398 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RAPGEF3O95398 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RAPGEF3O95398 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC25.77■■□□□ 1.72
RAPGEF3O95398 AL138918.1-201ENST00000568306 659 ntBASIC25.77■■□□□ 1.72
RAPGEF3O95398 AC140912.1-201ENST00000577171 1054 ntBASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms