Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKL5O76039 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.28■□□□□ 0.84
CDKL5O76039 NUS1P2-201ENST00000417358 873 ntBASIC20.28■□□□□ 0.84
CDKL5O76039 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKL5O76039 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKL5O76039 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.28■□□□□ 0.84
CDKL5O76039 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.28■□□□□ 0.84
CDKL5O76039 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CDKL5O76039 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKL5O76039 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDKL5O76039 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CDKL5O76039 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKL5O76039 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKL5O76039 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL5O76039 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CDKL5O76039 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDKL5O76039 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.27■□□□□ 0.83
CDKL5O76039 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.27■□□□□ 0.83
CDKL5O76039 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 PMPCAP1-201ENST00000508114 1576 ntBASIC20.26■□□□□ 0.83
CDKL5O76039 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDKL5O76039 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.26■□□□□ 0.83
CDKL5O76039 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.26■□□□□ 0.83
CDKL5O76039 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDKL5O76039 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKL5O76039 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.26■□□□□ 0.83
CDKL5O76039 MIR5100-201ENST00000579544 119 ntBASIC20.26■□□□□ 0.83
CDKL5O76039 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.26■□□□□ 0.83
CDKL5O76039 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKL5O76039 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CDKL5O76039 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CDKL5O76039 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.26■□□□□ 0.83
CDKL5O76039 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.26■□□□□ 0.83
CDKL5O76039 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL5O76039 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKL5O76039 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDKL5O76039 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDKL5O76039 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDKL5O76039 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDKL5O76039 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL5O76039 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.25■□□□□ 0.83
CDKL5O76039 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDKL5O76039 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL5O76039 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDKL5O76039 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL5O76039 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDKL5O76039 KRT16P4-201ENST00000453883 522 ntBASIC20.25■□□□□ 0.83
CDKL5O76039 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.25■□□□□ 0.83
CDKL5O76039 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKL5O76039 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKL5O76039 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL5O76039 AC138894.3-201ENST00000603787 634 ntBASIC20.25■□□□□ 0.83
CDKL5O76039 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL5O76039 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKL5O76039 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.25■□□□□ 0.83
CDKL5O76039 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.25■□□□□ 0.83
CDKL5O76039 AP000867.4-201ENST00000641616 219 ntBASIC20.25■□□□□ 0.83
CDKL5O76039 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDKL5O76039 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL5O76039 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKL5O76039 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDKL5O76039 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKL5O76039 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL5O76039 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL5O76039 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL5O76039 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKL5O76039 AC093525.9-201ENST00000624961 1746 ntBASIC20.24■□□□□ 0.83
CDKL5O76039 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDKL5O76039 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms