Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.63■■□□□ 1.05
SRGAP3O43295 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRGAP3O43295 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.63■■□□□ 1.05
SRGAP3O43295 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.63■■□□□ 1.05
SRGAP3O43295 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.63■■□□□ 1.05
SRGAP3O43295 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SRGAP3O43295 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SRGAP3O43295 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRGAP3O43295 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.63■■□□□ 1.05
SRGAP3O43295 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRGAP3O43295 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SRGAP3O43295 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRGAP3O43295 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRGAP3O43295 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 AC138932.1-201ENST00000534164 6830 ntBASIC21.62■■□□□ 1.05
SRGAP3O43295 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.62■■□□□ 1.05
SRGAP3O43295 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SRGAP3O43295 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SRGAP3O43295 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.62■■□□□ 1.05
SRGAP3O43295 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 MIR7706-201ENST00000613747 67 ntBASIC21.62■■□□□ 1.05
SRGAP3O43295 AL589182.2-201ENST00000619332 1049 ntBASIC21.62■■□□□ 1.05
SRGAP3O43295 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.62■■□□□ 1.05
SRGAP3O43295 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 CROCCP2-202ENST00000412962 2773 ntBASIC21.62■■□□□ 1.05
SRGAP3O43295 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.62■■□□□ 1.05
SRGAP3O43295 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP3O43295 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
SRGAP3O43295 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SRGAP3O43295 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP3O43295 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.61■■□□□ 1.05
SRGAP3O43295 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP3O43295 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.61■■□□□ 1.05
SRGAP3O43295 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP3O43295 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SRGAP3O43295 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP3O43295 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP3O43295 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP3O43295 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SRGAP3O43295 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.61■■□□□ 1.05
SRGAP3O43295 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.61■■□□□ 1.05
SRGAP3O43295 LAGE3P1-201ENST00000425356 484 ntBASIC21.61■■□□□ 1.05
SRGAP3O43295 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.61■■□□□ 1.05
SRGAP3O43295 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.61■■□□□ 1.05
SRGAP3O43295 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SRGAP3O43295 AC012640.2-201ENST00000561606 901 ntBASIC21.61■■□□□ 1.05
SRGAP3O43295 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.61■■□□□ 1.05
SRGAP3O43295 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.61■■□□□ 1.05
SRGAP3O43295 AP001005.1-201ENST00000571755 1248 ntBASIC21.61■■□□□ 1.05
SRGAP3O43295 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.61■■□□□ 1.05
SRGAP3O43295 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SRGAP3O43295 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP3O43295 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP3O43295 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.61■■□□□ 1.05
SRGAP3O43295 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.61■■□□□ 1.05
SRGAP3O43295 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP3O43295 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP3O43295 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SRGAP3O43295 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
SRGAP3O43295 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.6■■□□□ 1.05
SRGAP3O43295 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 LINC00982-205ENST00000420957 435 ntBASIC21.6■■□□□ 1.05
SRGAP3O43295 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.6■■□□□ 1.05
SRGAP3O43295 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.6■■□□□ 1.05
SRGAP3O43295 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.6■■□□□ 1.05
SRGAP3O43295 AC139887.3-201ENST00000568585 713 ntBASIC21.6■■□□□ 1.05
SRGAP3O43295 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.6■■□□□ 1.05
SRGAP3O43295 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.6■■□□□ 1.05
SRGAP3O43295 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SRGAP3O43295 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SRGAP3O43295 NCF1C-201ENST00000438382 1427 ntBASIC21.6■■□□□ 1.05
SRGAP3O43295 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.6■■□□□ 1.05
SRGAP3O43295 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SRGAP3O43295 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms