Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NDUFA1O15239 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NDUFA1O15239 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.97□□□□□ -0.49
NDUFA1O15239 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFA1O15239 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFA1O15239 AC132938.6-201ENST00000623828 1655 ntBASIC11.97□□□□□ -0.49
NDUFA1O15239 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NDUFA1O15239 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFA1O15239 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.96□□□□□ -0.49
NDUFA1O15239 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.96□□□□□ -0.49
NDUFA1O15239 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
NDUFA1O15239 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
NDUFA1O15239 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 AC092338.2-201ENST00000568827 1415 ntBASIC11.96□□□□□ -0.49
NDUFA1O15239 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
NDUFA1O15239 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 ILF2-202ENST00000368681 726 ntTSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC11.96□□□□□ -0.49
NDUFA1O15239 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC11.96□□□□□ -0.49
NDUFA1O15239 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.96□□□□□ -0.49
NDUFA1O15239 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.96□□□□□ -0.49
NDUFA1O15239 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC11.96□□□□□ -0.49
NDUFA1O15239 Z99916.2-201ENST00000604037 246 ntBASIC11.96□□□□□ -0.49
NDUFA1O15239 AP000525.1-201ENST00000608286 694 ntBASIC11.96□□□□□ -0.49
NDUFA1O15239 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.96□□□□□ -0.49
NDUFA1O15239 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC11.96□□□□□ -0.49
NDUFA1O15239 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NDUFA1O15239 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NDUFA1O15239 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC11.96□□□□□ -0.5
NDUFA1O15239 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NDUFA1O15239 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
NDUFA1O15239 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
NDUFA1O15239 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NDUFA1O15239 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.5
NDUFA1O15239 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
NDUFA1O15239 AC005915.1-201ENST00000624912 2018 ntBASIC11.96□□□□□ -0.5
NDUFA1O15239 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.96□□□□□ -0.5
NDUFA1O15239 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
NDUFA1O15239 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NDUFA1O15239 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NDUFA1O15239 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NDUFA1O15239 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.5
NDUFA1O15239 REXO1L11P-201ENST00000620964 1927 ntBASIC11.96□□□□□ -0.5
NDUFA1O15239 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.95□□□□□ -0.5
NDUFA1O15239 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
NDUFA1O15239 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
NDUFA1O15239 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 AC063926.3-201ENST00000624734 5658 ntBASIC11.95□□□□□ -0.5
NDUFA1O15239 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.95□□□□□ -0.5
NDUFA1O15239 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC11.95□□□□□ -0.5
NDUFA1O15239 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
NDUFA1O15239 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
NDUFA1O15239 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
NDUFA1O15239 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.95□□□□□ -0.5
NDUFA1O15239 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.95□□□□□ -0.5
NDUFA1O15239 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
NDUFA1O15239 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11.95□□□□□ -0.5
NDUFA1O15239 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
NDUFA1O15239 MIR1238-201ENST00000408483 83 ntBASIC11.95□□□□□ -0.5
NDUFA1O15239 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
NDUFA1O15239 AC007663.1-201ENST00000438948 1240 ntBASIC11.95□□□□□ -0.5
NDUFA1O15239 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC11.95□□□□□ -0.5
NDUFA1O15239 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NDUFA1O15239 AC008550.1-201ENST00000511500 884 ntBASIC11.95□□□□□ -0.5
NDUFA1O15239 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC11.95□□□□□ -0.5
NDUFA1O15239 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC11.95□□□□□ -0.5
NDUFA1O15239 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms