Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ATP2A1O14983 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ATP2A1O14983 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ATP2A1O14983 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.91■□□□□ 0.78
ATP2A1O14983 PDPK2P-202ENST00000562415 1191 ntBASIC19.91■□□□□ 0.78
ATP2A1O14983 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.91■□□□□ 0.78
ATP2A1O14983 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.91■□□□□ 0.78
ATP2A1O14983 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.91■□□□□ 0.78
ATP2A1O14983 LINC01451-201ENST00000623792 534 ntBASIC19.91■□□□□ 0.78
ATP2A1O14983 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ATP2A1O14983 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
ATP2A1O14983 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ATP2A1O14983 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.91■□□□□ 0.78
ATP2A1O14983 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
ATP2A1O14983 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
ATP2A1O14983 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A1O14983 AL135999.2-201ENST00000622438 1686 ntBASIC19.91■□□□□ 0.78
ATP2A1O14983 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP2A1O14983 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
ATP2A1O14983 AC046185.3-201ENST00000623228 1824 ntBASIC19.9■□□□□ 0.78
ATP2A1O14983 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 BICD1-207ENST00000551848 1962 ntBASIC19.9■□□□□ 0.78
ATP2A1O14983 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
ATP2A1O14983 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP2A1O14983 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP2A1O14983 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP2A1O14983 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP2A1O14983 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.9■□□□□ 0.78
ATP2A1O14983 ALG1L5P-201ENST00000482043 771 ntBASIC19.9■□□□□ 0.78
ATP2A1O14983 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP2A1O14983 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP2A1O14983 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP2A1O14983 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP2A1O14983 ABALON-201ENST00000629058 1903 ntBASIC19.9■□□□□ 0.78
ATP2A1O14983 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ATP2A1O14983 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP2A1O14983 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A1O14983 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
ATP2A1O14983 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A1O14983 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A1O14983 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ATP2A1O14983 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A1O14983 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A1O14983 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ATP2A1O14983 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATP2A1O14983 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ATP2A1O14983 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATP2A1O14983 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.89■□□□□ 0.77
ATP2A1O14983 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A1O14983 RPS8P6-201ENST00000426177 609 ntBASIC19.89■□□□□ 0.77
ATP2A1O14983 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.89■□□□□ 0.77
ATP2A1O14983 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A1O14983 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.89■□□□□ 0.77
ATP2A1O14983 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A1O14983 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP2A1O14983 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP2A1O14983 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ATP2A1O14983 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A1O14983 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP2A1O14983 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.89■□□□□ 0.77
ATP2A1O14983 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
ATP2A1O14983 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.89■□□□□ 0.77
ATP2A1O14983 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.89■□□□□ 0.77
ATP2A1O14983 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATP2A1O14983 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
ATP2A1O14983 AC004877.2-201ENST00000623941 599 ntBASIC19.89■□□□□ 0.77
ATP2A1O14983 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.89■□□□□ 0.77
ATP2A1O14983 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A1O14983 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.89■□□□□ 0.77
ATP2A1O14983 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms