Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH17O14917 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH17O14917 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDH17O14917 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH17O14917 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH17O14917 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDH17O14917 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 SCARNA2-201ENST00000458748 420 ntBASIC16.68■□□□□ 0.26
PCDH17O14917 AC122714.2-201ENST00000502787 707 ntBASIC16.68■□□□□ 0.26
PCDH17O14917 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH17O14917 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH17O14917 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH17O14917 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDH17O14917 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH17O14917 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDH17O14917 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDH17O14917 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDH17O14917 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH17O14917 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDH17O14917 AKR1C7P-201ENST00000305623 895 ntBASIC16.67■□□□□ 0.26
PCDH17O14917 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.67■□□□□ 0.26
PCDH17O14917 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDH17O14917 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDH17O14917 AP002469.2-201ENST00000531724 424 ntBASIC16.67■□□□□ 0.26
PCDH17O14917 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDH17O14917 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH17O14917 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDH17O14917 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH17O14917 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PCDH17O14917 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PCDH17O14917 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDH17O14917 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDH17O14917 AL355312.1-201ENST00000407115 2176 ntBASIC16.67■□□□□ 0.26
PCDH17O14917 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDH17O14917 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH17O14917 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH17O14917 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH17O14917 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH17O14917 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDH17O14917 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH17O14917 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms