Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC27.81■■■□□ 2.04
CHD1O14646 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHD1O14646 MTRF1LP2-201ENST00000506027 1122 ntBASIC27.81■■■□□ 2.04
CHD1O14646 AC105233.2-201ENST00000523697 349 ntBASIC27.81■■■□□ 2.04
CHD1O14646 AF228730.5-201ENST00000530288 346 ntBASIC27.81■■■□□ 2.04
CHD1O14646 MIR4538-201ENST00000581377 78 ntBASIC27.81■■■□□ 2.04
CHD1O14646 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC27.81■■■□□ 2.04
CHD1O14646 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CHD1O14646 AL109936.8-201ENST00000641772 604 ntBASIC27.81■■■□□ 2.04
CHD1O14646 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
CHD1O14646 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHD1O14646 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHD1O14646 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHD1O14646 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC27.8■■■□□ 2.04
CHD1O14646 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC27.8■■■□□ 2.04
CHD1O14646 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC27.8■■■□□ 2.04
CHD1O14646 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CHD1O14646 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC27.8■■■□□ 2.04
CHD1O14646 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
CHD1O14646 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
CHD1O14646 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
CHD1O14646 AC234783.1-201ENST00000441761 496 ntBASIC27.8■■■□□ 2.04
CHD1O14646 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CHD1O14646 GLI4-203ENST00000517468 963 ntTSL 5 BASIC27.8■■■□□ 2.04
CHD1O14646 CHCHD2P3-201ENST00000603038 451 ntBASIC27.8■■■□□ 2.04
CHD1O14646 AC003101.2-201ENST00000612557 442 ntBASIC27.8■■■□□ 2.04
CHD1O14646 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC27.8■■■□□ 2.04
CHD1O14646 COX11-210ENST00000639671 696 ntBASIC27.8■■■□□ 2.04
CHD1O14646 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC27.8■■■□□ 2.04
CHD1O14646 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC27.8■■■□□ 2.04
CHD1O14646 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHD1O14646 AC087499.5-201ENST00000452760 1342 ntBASIC27.8■■■□□ 2.04
CHD1O14646 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC27.79■■■□□ 2.04
CHD1O14646 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC27.79■■■□□ 2.04
CHD1O14646 SLC7A15P-201ENST00000424028 1363 ntBASIC27.79■■■□□ 2.04
CHD1O14646 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD1O14646 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC27.79■■■□□ 2.04
CHD1O14646 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
CHD1O14646 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC27.79■■■□□ 2.04
CHD1O14646 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC27.79■■■□□ 2.04
CHD1O14646 ZNF890P-202ENST00000530367 1156 ntBASIC27.79■■■□□ 2.04
CHD1O14646 AL512343.1-201ENST00000605837 169 ntBASIC27.79■■■□□ 2.04
CHD1O14646 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
CHD1O14646 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC27.79■■■□□ 2.04
CHD1O14646 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD1O14646 AL096828.2-201ENST00000567259 1965 ntBASIC27.79■■■□□ 2.04
CHD1O14646 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD1O14646 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
CHD1O14646 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD1O14646 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHD1O14646 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
CHD1O14646 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC27.78■■■□□ 2.04
CHD1O14646 AC092933.1-201ENST00000393644 945 ntBASIC27.78■■■□□ 2.04
CHD1O14646 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC27.78■■■□□ 2.04
CHD1O14646 HLA-DPB2-205ENST00000435074 1188 ntBASIC27.78■■■□□ 2.04
CHD1O14646 AP005482.1-201ENST00000563722 1273 ntBASIC27.78■■■□□ 2.04
CHD1O14646 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC27.78■■■□□ 2.04
CHD1O14646 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC27.78■■■□□ 2.04
CHD1O14646 STX3-203ENST00000529177 1571 ntTSL 2 BASIC27.78■■■□□ 2.04
CHD1O14646 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHD1O14646 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHD1O14646 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC27.78■■■□□ 2.04
CHD1O14646 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHD1O14646 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC27.78■■■□□ 2.04
CHD1O14646 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC27.78■■■□□ 2.04
CHD1O14646 RN7SL752P-201ENST00000463779 287 ntBASIC27.78■■■□□ 2.04
CHD1O14646 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CHD1O14646 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC27.78■■■□□ 2.04
CHD1O14646 ORC6-206ENST00000568364 888 ntTSL 5 BASIC27.78■■■□□ 2.04
CHD1O14646 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC27.78■■■□□ 2.04
CHD1O14646 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHD1O14646 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CHD1O14646 KRT8P44-201ENST00000441609 1350 ntBASIC27.77■■■□□ 2.04
CHD1O14646 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC27.77■■■□□ 2.04
CHD1O14646 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CHD1O14646 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CHD1O14646 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CHD1O14646 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
CHD1O14646 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CHD1O14646 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CHD1O14646 BNIP3P42-201ENST00000454982 569 ntBASIC27.77■■■□□ 2.04
CHD1O14646 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC27.77■■■□□ 2.04
CHD1O14646 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CHD1O14646 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC27.77■■■□□ 2.04
CHD1O14646 BNIP3P29-201ENST00000598302 571 ntBASIC27.77■■■□□ 2.04
CHD1O14646 AC011447.5-201ENST00000616168 564 ntBASIC27.77■■■□□ 2.04
CHD1O14646 MIR6787-201ENST00000616675 61 ntBASIC27.77■■■□□ 2.04
CHD1O14646 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC27.77■■■□□ 2.04
CHD1O14646 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC27.77■■■□□ 2.04
CHD1O14646 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CHD1O14646 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CHD1O14646 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CHD1O14646 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CHD1O14646 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC27.76■■■□□ 2.03
CHD1O14646 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC27.76■■■□□ 2.03
CHD1O14646 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHD1O14646 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC27.76■■■□□ 2.03
CHD1O14646 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
CHD1O14646 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC27.76■■■□□ 2.03
CHD1O14646 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC27.76■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms